Evidence map›Paper›PMID 18400952›Full record

ArticleBiophysical journal2008

A residue at the cytoplasmic entrance of BK-type channels regulating single-channel opening by its hydrophobicity.

Zhaohua Guo, Caixia Lv, Hong Yi, Yu Xiong, Yingliang Wu, Wenxin Li, Tao Xu, Jiuping Ding

Abstract read
In one paragraph

Article in Biophysical journal, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Amelogenin in Enamel Tissue Engineering.Advances in experimental medicine and biology · 2015
    Article
  4. Article
  5. Intersubunit coupling in the pore of BK channels.The Journal of biological chemistry · 2009
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Zhaohua GuoKey Laboratory of Molecular Biophysics (Huazhong University of Science and Technology), Ministry of Education, College of Life Science and Technology, Wuhan, Hubei 430074, China.
Caixia Lv
Hong Yi
Yu Xiong
Yingliang Wu
Wenxin Li
Tao Xu
Jiuping Ding

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Single large-conductance calcium-activated K(+) (BK) channels encoded by the mSlo gene usually have synchronous gating, but a Drosophila dSlo (A2/C2/E2/G5/10) splice variant (dSlo1A) exhibits very flickery openings. To probe this difference in gating, we constructed a mutant I323T. This channel exhibits four subconductance levels similar to those of dSlo1A. Rectification of the single-channel current-voltage relation of I323T decreased as [Ca(2+) ](in) increased from 10 to 300 microM. Mutagenesis suggests that the hydrophobicity of the residue at the position is important for the wild-type gating; i.e., increasing hydrophobicity prolongs open duration. Molecular dynamics simulation suggests that four hydrophobic pore-lining residues at position 323 of mSlo act cooperatively in a "shutter-like" mechanism gating the permeation of K(+) ions. Rate-equilibrium free energy relations analysis shows that the four I323 residues in an mSlo channel have a conformation 65% similar to the closed conformation during gating. Based on these observations, we suggest that the appearance of rectification and substates of BK-type channels arise from a reduction of the cooperativity among these four residues and a lower probability of being open.

Indexed as

Hydrophobic and Hydrophilic InteractionsIon Channel GatingAnimalsCalciumCytoplasmIsoleucineLarge-Conductance Calcium-Activated Potassium ChannelsMiceMutationThreonineCalciumIsoleucineLarge-Conductance Calcium-Activated Potassium ChannelsThreonine

Identifiers

PMID18400952
PMCPMC2292367

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.