Evidence map›Paper›PMID 18400915›Full record

ArticleJournal of clinical microbiology2008

Genetic differentiation of Escherichia coli O157:H7 clades associated with human disease by real-time PCR.

James T Riordan, Sandeep B Viswanath, Shannon D Manning, Thomas S Whittam

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.7field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  10. The Virulence ofFrontiers in cellular and infection microbiology · 2020
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  11. Pathogenomes of Atypical Non-shigatoxigenicFrontiers in microbiology · 2020
    Article
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  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

James T RiordanMicrobial Evolution Laboratory, National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan 48824, USA.
Sandeep B Viswanath
Shannon D Manning
Thomas S Whittam
Michigan State University · US

Funding

NIAID NIH HHS N01 AI030058NIAID NIH HHS N01-AI-30058
6 · The paper itself

Abstract

The rapid and accurate identification of Escherichia coli O157:H7 strains is central to reducing the impact of outbreaks. A real-time PCR-based approach to differentiating major outbreak lineages of O157 with novel single-nucleotide polymorphisms is described. The utility of this method is in detection of hypervirulent strains in cases of clinical disease.

Indexed as

Bacterial Typing TechniquesDNA, BacterialDNA PrimersEscherichia coli InfectionsEscherichia coli O157Escherichia coli ProteinsHumansPolymerase Chain ReactionPolymorphism, Single NucleotideSensitivity and SpecificityTime FactorsDNA, BacterialDNA PrimersEscherichia coli Proteins

Identifiers

PMID18400915
PMCPMC2446876
OpenAlexW2089835122

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.