Evidence map›Paper›PMID 18398933›Full record

ArticleEuropean journal of immunology2008

Antigen structure influences helper T-cell epitope dominance in the human immune response to HIV envelope glycoprotein gp120.

Denise Mirano-Bascos, Magdalena Tary-Lehmann, Samuel J Landry

Open access · bronzeAbstract read
In one paragraph

Article in European journal of immunology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
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  8. Deimmunizing substitutions inThe Journal of biological chemistry · 2019
    Article
  9. Article
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  11. Modulation of HIVGP120 Antigen-Specific Immune Responses In Vivo by Δ9-Tetrahydrocannabinol.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2015
    Article
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Denise Mirano-BascosInterdisciplinary Program in the Biomedical Sciences, Tulane University, New Orleans, LA 70112, USA.
Magdalena Tary-Lehmann
Samuel J Landry
Case Western Reserve University · USTulane University · US

Funding

WG3: HIV, Co-infections and Co-morbiditiesP30AI036219 · NIAID · CASE WESTERN RESERVE UNIVERSITY · PI Sharon L. Hillier, JONATHAN KARN · 1994 to 2026
$50.0M
SINGLE CELL ANALYSIS OF T CELL IMMUNITY IN HIVR01AI047756 · NIAID · CASE WESTERN RESERVE UNIVERSITY · PI TARY-LEHMANN, MAGDALENA · 2000 to 2004
$1.3M
HIV ENV epitope engineeringR01AI080367 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI LANDRY, SAMUEL JOHN · 2009 to 2011
$1.1M
HELPER T CELL EPITOPE IMMUNODOMINANCER01AI042350 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI LANDRY, SAMUEL JOHN · 1998 to 2000
$199k
TARGETED CD4+ T CELL RESPONSE TO HIV GP120 IN MICER21AI042702 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI LANDRY, SAMUEL JOHN · 1997 to 1998
–
NIAID NIH HHS AI 36219NIAID NIH HHS AI 42350NIAID NIH HHS AI 427202NIAID NIH HHS AI 47756NIAID NIH HHS P30 AI036219NIAID NIH HHS R01 AI047756NIAID NIH HHS R01 AI080367
6 · The paper itself

Abstract

The development of an effective vaccine against HIV/AIDS has been hampered, in part, by a poor understanding of the rules governing helper T-cell epitope immunodominance. Studies in mice have shown that antigen structure modulates epitope immunodominance by affecting the processing and subsequent presentation of helper T-cell epitopes. Previous epitope mapping studies showed that the immunodominant helper T-cell epitopes in mice immunized with gp120 were found flanking flexible loops of the protein. In this report, we show that helper T-cell epitopes against gp120 in humans infected with HIV are also found flanking flexible loops. Immunodominant epitopes were found to be located primarily in the outer domain, an average of 12 residues C-terminal to flexible loops. In the less immunogenic inner domain, epitopes were found an average of five residues N-terminal to conserved regions of the protein, once again placing the epitopes C-terminal to flexible loops. These results show that antigen structure plays a significant role in the shaping of the helper T-cell response against HIV gp120 in humans. This relationship between antigen structure and helper T-cell epitope immunodominance may prove to be useful in the development of rationally designed vaccines against pathogens such as HIV.

Indexed as

Antigen PresentationCrystallography, X-RayEpitopes, T-LymphocyteHIV Envelope Protein gp120HumansImmunodominant EpitopesInterferon-gammaLeukocytes, MononuclearModels, ImmunologicalProtein ConformationT-LymphocytesEpitopes, T-LymphocyteHIV Envelope Protein gp120Immunodominant EpitopesInterferon-gamma

Identifiers

PMID18398933
PMCPMC3855344
OpenAlexW2005105231

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.