ArticlePloS one2008
Environmental adaptation: genomic analysis of the piezotolerant and psychrotolerant deep-sea iron reducing bacterium Shewanella piezotolerans WP3.
Article in PloS one, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 69 papers.
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69 citing papers in PubMed.
- Multi-Omics Reveal Extracellular Electron Transfer Mechanism Under Deep-Sea High Salinity.Environmental microbiology · 2026Article
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- Novel Insights on Extracellular Electron Transfer Networks in theMicroorganisms · 2024Article
- Metabolic adaptations ofFrontiers in microbiology · 2024Article
- Unraveling Biohydrogen Production and Sugar Utilization Systems in the ElectricigenJournal of microbiology and biotechnology · 2023Article
- Comparative genomic analysis of Stenotrophomonas maltophilia unravels their genetic variations and versatility trait.Journal of applied genetics · 2023Article
- The methanogen core and pangenome: conservation and variability across biology's growth temperature extremes.DNA research : an international journal for rapid publication of reports on genes and genomes · 2023Article
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- Global occurrence of the bacteria with capability for extracellular reduction of iodate.Frontiers in microbiology · 2022Article
- The origin and impeded dissemination of the DNA phosphorothioation system in prokaryotes.Nature communications · 2021Article
- A deep-sea bacterium related to coastal marine pathogens.Environmental microbiology · 2021Article
- Transcriptomic Analysis Reveals Common Adaptation Mechanisms Under Different Stresses for Moderately Piezophilic Bacteria.Microbial ecology · 2021Article
- Condition-Specific Molecular Network Analysis Revealed That Flagellar Proteins Are Involved in Electron Transfer Processes ofGenetics research · 2021Article
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- Flagellation of Shewanella oneidensis Impacts Bacterial Fitness in Different Environments.Current microbiology · 2020Article
- Porin from Marine BacteriumMolecules (Basel, Switzerland) · 2020Article
- Mechanomicrobiology: how bacteria sense and respond to forces.Nature reviews. Microbiology · 2020Review
9 more citing papers are in PubMed but not listed here.
Corrections and comments
- Erratum issued
Authors and funding
12 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Shewanella species are widespread in various environments. Here, the genome sequence of Shewanella piezotolerans WP3, a piezotolerant and psychrotolerant iron reducing bacterium from deep-sea sediment was determined with related functional analysis to study its environmental adaptation mechanisms. The genome of WP3 consists of 5,396,476 base pairs (bp) with 4,944 open reading frames (ORFs). It possesses numerous genes or gene clusters which help it to cope with extreme living conditions such as genes for two sets of flagellum systems, structural RNA modification, eicosapentaenoic acid (EPA) biosynthesis and osmolyte transport and synthesis. And WP3 contains 55 open reading frames encoding putative c-type cytochromes which are substantial to its wide environmental adaptation ability. The mtr-omc gene cluster involved in the insoluble metal reduction in the Shewanella genus was identified and compared. The two sets of flagellum systems were found to be differentially regulated under low temperature and high pressure; the lateral flagellum system was found essential for its motility and living at low temperature.
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