Evidence map›Paper›PMID 18389388›Full record

ArticleFamilial cancer2008

Mutation spectrum in HNPCC in the Israeli population.

Yael Goldberg, Rinnat M Porat, Inbal Kedar, Chen Shochat, Michal Sagi, Avital Eilat, Suzan Mendelson, Tamar Hamburger, Aviram Nissan, Ayala Hubert and 6 more

Abstract read
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In one paragraph

Article in Familial cancer, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Pooled it
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  6. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Yael GoldbergSharret Institute of Oncology, Hadassah-Hebrew University Medical Center, POB 12000, Kyriat Hadassah, 91120, Jerusalem, Israel. yaelg@hadassah.org.il
Rinnat M Porat
Inbal Kedar
Chen Shochat
Michal Sagi
Avital Eilat
Suzan Mendelson
Tamar Hamburger
Aviram Nissan
Ayala Hubert
Luna Kadouri
Eli Pikarski
Israela Lerer
Dvorah Abeliovich
Dani Bercovich
Tamar Peretz
Hadassah Medical Center · ILMigal - Galilee Technology Center · ILRabin Medical Center · ILTel Hai Academic College · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hereditary non-polyposis colon cancer is caused by mutations in DNA mismatch repair genes. The mutation spectrum in the Israeli population is poorly documented except for the c.1906G>C Ashkenazi founder mutation in the hMSH2 gene. To report our experience in HNPCC screening, the mutations detected and the clinical features among a cohort of Israeli patients. Diagnostic work-up was done in a multi-step process guided by clinical and ethnic information. Tumors of suspected patients were tested for microsatellite instability and immunohistochemistry. Based on tumor analyses, we proceeded to mutation screening by DHPLC followed by sequence analysis and multiplex ligase dependent probe amplification. Ashkenazi Jews were first tested for the c.1906G>C founder mutation. Of the 240 families, 24, including Arabs and Jews from different ethnic origins, were tested positive. All tumors that lost expression of mismatch repair proteins also showed microsatellite instability. There was evidence for involvement of hMSH2 (15) hMLH1 (6) and hMSH6 (3) genes. Mutations were identified in 17/24 (71%) patients: 6 Ashkenazi families harbored the c.1906G>C mutation. Eleven other mutations (2 nonsense, 3 splice site and 6 small deletions) were detected. Three of the mutations are novel. No gross deletions or insertions were detected. This is the first report that characterizes the profile of HNPCC in a cohort of patients in Israel. Tumor testing indicated that the 3 main MMR genes are involved, and that mutation spectrum is broad.

Indexed as

DNA Mismatch RepairMutationAdultAlgorithmsColorectal Neoplasms, Hereditary NonpolyposisFemaleHumansIsraelJewsMalePedigreePopulation GroupsRetrospective Studies

Identifiers

PMID18389388
OpenAlexW1998899837

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.