Evidence map›Paper›PMID 18388858›Full record

ArticleThe EMBO journal2008

Arabidopsis COP1 shapes the temporal pattern of CO accumulation conferring a photoperiodic flowering response.

Seonghoe Jang, Virginie Marchal, Kishore C S Panigrahi, Stephan Wenkel, Wim Soppe, Xing-Wang Deng, Federico Valverde, George Coupland

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 266 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
266citing papers in PubMed, 2 pooled it
38.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

266 citing papers in PubMed, 2 syntheses or guidelines pooled it, 512 citations in OpenAlex.

  1. Pooled it
  2. Transcriptomic Data Meta-Analysis Sheds Light on High Light Response inInternational journal of molecular sciences · 2022
    Pooled it
  3. Review
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  10. Plants (Basel, Switzerland) · 2026
    Article
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  20. Review

206 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Seonghoe JangDepartment of Plant Developmental Biology, Max Planck Institute for Plant Breeding Research, Cologne, Germany.
Virginie Marchal
Kishore C S Panigrahi
Stephan Wenkel
Wim Soppe
Xing-Wang Deng
Federico Valverde
George Coupland
Max Planck Institute for Plant Breeding Research · DEInstituto de Bioquímica Vegetal y Fotosíntesis · ESYale University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transcriptional regulator CONSTANS (CO) promotes flowering of Arabidopsis under long summer days (LDs) but not under short winter days (SDs). Post-translational regulation of CO is crucial for this response by stabilizing the protein at the end of a LD, whereas promoting its degradation throughout the night under LD and SD. We show that mutations in CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1), a component of a ubiquitin ligase, cause extreme early flowering under SDs, and that this is largely dependent on CO activity. Furthermore, transcription of the CO target gene FT is increased in cop1 mutants and decreased in plants overexpressing COP1 in phloem companion cells. COP1 and CO interact in vivo and in vitro through the C-terminal region of CO. COP1 promotes CO degradation mainly in the dark, so that in cop1 mutants CO protein but not CO mRNA abundance is dramatically increased during the night. However, in the morning CO degradation occurs independently of COP1 by a phytochrome B-dependent mechanism. Thus, COP1 contributes to day length perception by reducing the abundance of CO during the night and thereby delaying flowering under SDs.

Indexed as

PhotoperiodArabidopsisArabidopsis ProteinsCircadian RhythmDNA-Binding ProteinsFlowersLightMutationProtein Interaction MappingSuppression, GeneticTranscription FactorsUbiquitin-Protein LigasesArabidopsis ProteinsAT2G32950 protein, ArabidopsisCONSTANS protein, ArabidopsisDNA-Binding ProteinsTranscription FactorsUbiquitin-Protein Ligases

Identifiers

PMID18388858
PMCPMC2291449
OpenAlexW2132650496

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.