Evidence map›Paper›PMID 18384058›Full record

ArticleAmerican journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics2008

A de novo apparently balanced translocation [46,XY,t(2;9)(p13;p24)] interrupting RAB11FIP5 identifies a potential candidate gene for autism spectrum disorder.

Jasmin Roohi, David H Tegay, John C Pomeroy, Sandra Burkett, Gary Stone, Roscoe Stanyon, Eli Hatchwell

Open access · greenAbstract readCase Reports
In one paragraph

Article in American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. A rigorousFrontiers in molecular neuroscience · 2022
    Article
  2. Article
  3. Article
  4. ImmunoHorizons · 2020
    Article
  5. Article
  6. Synaptic Function of Rab11Fip5: Selective Requirement for Hippocampal Long-Term Depression.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2015
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Jasmin RoohiDepartment of Genetics, Stony Brook University, Stony Brook, New York, USA.
David H Tegay
John C Pomeroy
Sandra Burkett
Gary Stone
Roscoe Stanyon
Eli Hatchwell
National Cancer Institute · USStony Brook University · USStony Brook University Hospital · USUniversity of Florence · ITYork University · US

Funding

World Trade Center Worker and Volunteer Medical Screening ProgramM01RR010710 · NCRR · STATE UNIVERSITY NEW YORK STONY BROOK · PI GOLDSTEIN, RITA Z · 1998 to 2009
$17.6M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM008444 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI FROHMAN, MICHAEL A. · 1992 to 2024
$12.6M
Intramural NIH HHSNCRR NIH HHS M01 RR010710NCRR NIH HHS MO1RR10710NIGMS NIH HHS T32 GM008444
6 · The paper itself

Abstract

Autism spectrum disorder (ASD) is a severe developmental disorder of the central nervous system characterized by impairments in social interaction, communication, and range of interests and behaviors. The syndrome's prevalence is estimated to be as high as 1 in 150 American children yet its etiology remains largely unknown. Examination of observed cytogenetic variants in individuals with ASD may identify genes involved in its pathogenesis. As part of a multidisciplinary study, an apparently balanced de novo translocation between chromosomes 2 and 9 [46,XY,t(2;9)(p13;p24)] was identified in a subject with pervasive developmental disorder not otherwise specified (PDD-NOS), and no distinctive dysmorphic features. Molecular characterization of the rearrangement revealed direct interruption of the RAB11 family interacting protein 5 (RAB11FIP5) gene. RAB11FIP5 is a Rab effector involved in protein trafficking from apical recycling endosomes to the apical plasma membrane. It is ubiquitously expressed and reported to contribute to both neurotransmitter release and neurotransmitter uptake at the synaptic junction. Detailed analysis of the rearrangement breakpoints suggests that the reciprocal translocation may have formed secondary to incorrect repair of double strand breaks (DSBs) by nonhomologous end-joining (NHEJ).

Indexed as

Gene RearrangementTranslocation, GeneticAdaptor Proteins, Signal TransducingAutistic DisorderCarrier ProteinsChildChild Development Disorders, PervasiveChromosomes, Human, Pair 2Chromosomes, Human, Pair 9Genetic TestingHumansMaleMitochondrial ProteinsAdaptor Proteins, Signal TransducingCarrier ProteinsMitochondrial ProteinsRAB11FIP5 protein, human

Identifiers

PMID18384058
PMCPMC4355399
OpenAlexW2100595792

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.