Evidence map›Paper›PMID 18381894›Full record

ArticleGenes & development2008

DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes.

Satomi Kuramochi-Miyagawa, Toshiaki Watanabe, Kengo Gotoh, Yasushi Totoki, Atsushi Toyoda, Masahito Ikawa, Noriko Asada, Kanako Kojima, Yuka Yamaguchi, Takashi W Ijiri and 8 more

Open access · diamondAbstract read
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Article in Genes & development, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 494 papers.

0numbers the graph read from it
0cells of the map it votes in
494citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

494 citing papers in PubMed, 917 citations in OpenAlex.

  1. Review
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  9. bioRxiv : the preprint server for biology · 2026
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. A PIWI protein-dependent DNA N6-adenine methylation pathway inbioRxiv : the preprint server for biology · 2026
    Article
  16. Gonocytes in Transition: Establishing the Male Germline Identity.Advances in experimental medicine and biology · 2026
    Review
  17. Review
  18. Article
  19. Article
  20. Review

434 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 3 countries.

Satomi Kuramochi-MiyagawaDepartment of Pathology, Medical School, Graduate School of Frontier Biosciences, Research Institute for Microbial Diseases, Osaka University, Yamada-oka 2-2 Suita, Osaka 565-0871, Japan.
Toshiaki Watanabe
Kengo Gotoh
Yasushi Totoki
Atsushi Toyoda
Masahito Ikawa
Noriko Asada
Kanako Kojima
Yuka Yamaguchi
Takashi W Ijiri
Kenichiro Hata
En Li
Yoichi Matsuda
Tohru Kimura
Masaru Okabe
Yoshiyuki Sakaki
Hiroyuki Sasaki
Toru Nakano
Osaka University · JPHokkaido University · JPNational Institute of Genetics · JPNovartis (United States) · USCenter for Genomic Science · ITResearch Organization of Information and Systems · JPRIKEN · JPRIKEN Center for Integrative Medical Sciences · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Silencing of transposable elements occurs during fetal gametogenesis in males via de novo DNA methylation of their regulatory regions. The loss of MILI (miwi-like) and MIWI2 (mouse piwi 2), two mouse homologs of Drosophila Piwi, activates retrotransposon gene expression by impairing DNA methylation in the regulatory regions of the retrotransposons. However, as it is unclear whether the defective DNA methylation in the mutants is due to the impairment of de novo DNA methylation, we analyze DNA methylation and Piwi-interacting small RNA (piRNA) expression in wild-type, MILI-null, and MIWI2-null male fetal germ cells. We reveal that defective DNA methylation of the regulatory regions of the Line-1 (long interspersed nuclear elements) and IAP (intracisternal A particle) retrotransposons in the MILI-null and MIWI2-null male germ cells takes place at the level of de novo methylation. Comprehensive analysis shows that the piRNAs of fetal germ cells are distinct from those previously identified in neonatal and adult germ cells. The expression of piRNAs is reduced under MILI- and MIWI2-null conditions in fetal germ cells, although the extent of the reduction differs significantly between the two mutants. Our data strongly suggest that MILI and MIWI2 play essential roles in establishing de novo DNA methylation of retrotransposons in fetal male germ cells.

Indexed as

DNA MethylationAnimalsArgonaute ProteinsBlotting, NorthernCluster AnalysisCpG IslandsFemaleGene Expression ProfilingGene Expression Regulation, DevelopmentalGenotypeImmunoprecipitationMaleMiceMice, KnockoutOligonucleotide Array Sequence AnalysisProtein BindingArgonaute ProteinsPiwil1 protein, mousePiwil2 protein, mouseProteinsRetroelementsRNA, Untranslated

Identifiers

PMID18381894
PMCPMC2279202
OpenAlexW2105097906

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.