Evidence map›Paper›PMID 18375596›Full record

ArticlePlant physiology2008

SHORT HYPOCOTYL IN WHITE LIGHT1, a serine-arginine-aspartate-rich protein in Arabidopsis, acts as a negative regulator of photomorphogenic growth.

Shikha Bhatia, Sreeramaiah N Gangappa, Ritu Kushwaha, Snehangshu Kundu, Sudip Chattopadhyay

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Plant physiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.3field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Computing gene expression data with a knowledge-based gene clustering approach.International journal of biochemistry and molecular biology · 2010
    Article
  14. Article
4 · The record

Corrections and comments

  • Erratum issued
    Kuswaha, Ritu [corrected to Kushwaha, Ritu]
5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Shikha BhatiaNational Institute for Plant Genome Research, New Delhi 110067, India.
Sreeramaiah N Gangappa
Ritu Kushwaha
Snehangshu Kundu
Sudip Chattopadhyay
National Institute of Plant Genome Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Light is an important factor for plant growth and development. We have identified and functionally characterized a regulatory gene SHORT HYPOCOTYL IN WHITE LIGHT1 (SHW1) involved in Arabidopsis (Arabidopsis thaliana) seedling development. SHW1 encodes a unique serine-arginine-aspartate-rich protein, which is constitutively localized in the nucleus of hypocotyl cells. Transgenic analyses have revealed that the expression of SHW1 is developmentally regulated and is closely associated with the photosynthetically active tissues. Genetic and molecular analyses suggest that SHW1 acts as a negative regulator of light-mediated inhibition of hypocotyl elongation, however, plays a positive regulatory role in light-regulated gene expression. The shw1 mutants also display shorter hypocotyl in dark, and analyses of shw1 cop1 double mutants reveal that SHW1 acts nonredundantly with COP1 to control hypocotyl elongation in the darkness. Taken together, this study provides evidences that SHW1 is a regulatory protein that is functionally interrelated to COP1 and plays dual but opposite regulatory roles in photomorphogenesis.

Indexed as

LightAmino Acid SequenceArabidopsisArabidopsis ProteinsCell NucleolusChlorophyllCicerCloning, MolecularGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantHypocotylMolecular Sequence DataMorphogenesisMutationPlant ProteinsUbiquitin-Protein LigasesArabidopsis ProteinsAT2G32950 protein, ArabidopsisChlorophyllPlant ProteinsSHW1 protein, ArabidopsisUbiquitin-Protein Ligases

Identifiers

PMID18375596
PMCPMC2330309
OpenAlexW2014316615

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.