Evidence map›Paper›PMID 18375388›Full record

ArticleThe Journal of biological chemistry2008

3-isobutylmethylxanthine inhibits hepatic urea synthesis: protection by agmatine.

Itzhak Nissim, Oksana Horyn, Ilana Nissim, Yevgeny Daikhin, Suzanne L Wehrli, Marc Yudkoff

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Mechanisms that match ATP supply to demand in cardiac pacemaker cells during high ATP demand.American journal of physiology. Heart and circulatory physiology · 2013
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Itzhak NissimChildren's Hospital of Philadelphia, Division of Child Development, Department of Pediatrics, University of Pennsylvania School of Medicine, 34th Street and Civic Center Boulevard, Philadelphia, PA 19104, USA.
Oksana Horyn
Ilana Nissim
Yevgeny Daikhin
Suzanne L Wehrli
Marc Yudkoff
Children's Hospital of Philadelphia · USUniversity of Pennsylvania · US

Funding

RARE DISEASES CRC: UREA CYCLE DISORDERSU54RR019453 · NCRR · CHILDREN'S RESEARCH INSTITUTE · PI BATSHAW, MARK L. · 2003 to 2008
$7.0M
REGULATION OF 15N UREA ISOTOPOMERS PRODUCTIONR01DK053761 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI NISSIM, ITZHAK · 1999 to 2013
$4.4M
The molecular bases of inherited urea cycle disorders and ureagenesis regulationR01DK047870 · NIDDK · UNIVERSITY OF MINNESOTA TWIN CITIES · PI TUCHMAN, MENDEL · 1995 to 2010
$3.4M
Regulation of 15N Urea Isotopomers ProductionR56DK053761 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI NISSIM, ITZHAK · 2009 to 2009
$165k
THE GENETIC EPIDEMIOLOGY OF PATTERNS OF HUMAN GROWTHR01HD026971 · NICHD · WRIGHT STATE UNIVERSITY · PI SIERVOGEL, ROGER M · 1990 to 1994
–
NCRR NIH HHS U54 RR 019453NICHD NIH HHS HD 26971NIDDK NIH HHS DK 047870NIDDK NIH HHS DK 53761
6 · The paper itself

Abstract

We previously showed that agmatine stimulated hepatic ureagenesis. In this study, we sought to determine whether the action of agmatine is mediated via cAMP signaling. A pilot experiment demonstrated that the phosphodiesterase inhibitor, 3-isobutylmethylxanthine (IBMX), inhibited urea synthesis albeit increased [cAMP]. Thus, we hypothesized that IBMX inhibits hepatic urea synthesis independent of [cAMP]. We further theorized that agmatine would negate the IBMX action and improve ureagenesis. Experiments were carried out with isolated mitochondria and (15)NH(4)Cl to trace [(15)N]citrulline production or [5-(15)N]glutamine and a rat liver perfusion system to trace ureagenesis. The results demonstrate that IBMX induced the following: (i) inhibition of the mitochondrial respiratory chain and diminished O(2) consumption during liver perfusion; (ii) depletion of the phosphorylation potential and overall hepatic energetic capacity; (iii) inhibition of [(15)N]citrulline synthesis; and (iv) inhibition of urea output in liver perfusion with little effect on [N-acetylglutamate]. The results indicate that IBMX directly and specifically inhibited complex I of the respiratory chain and carbamoyl-phosphate synthase-I (CPS-I), with an EC(50) about 0.6 mm despite a significant elevation of hepatic [cAMP]. Perfusion of agmatine with IBMX stimulated O(2) consumption, restored hepatic phosphorylation potential, and significantly stimulated ureagenesis. The action of agmatine may signify a cascade effect initiated by increased oxidative phosphorylation and greater ATP synthesis. In addition, agmatine may prevent IBMX from binding to one or more active site(s) of CPS-I and thus protect against inhibition of CPS-I. Together, the data may suggest a new experimental application of IBMX in studies of CPS-I malfunction and the use of agmatine as intervention therapy.

Indexed as

1-Methyl-3-isobutylxanthineAgmatineAnimalsCarbamoyl-Phosphate Synthase (Ammonia)Cyclic AMPElectron TransportLiverMaleMitochondria, LiverOxygen ConsumptionPerfusionPhosphodiesterase InhibitorsPhosphoric Diester HydrolasesRatsRats, Sprague-DawleyUrea1-Methyl-3-isobutylxanthineAgmatineCarbamoyl-Phosphate Synthase (Ammonia)Cyclic AMPPhosphodiesterase InhibitorsPhosphoric Diester HydrolasesUrea

Identifiers

PMID18375388
PMCPMC2397462
OpenAlexW2007488843

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.