Evidence map›Paper›PMID 18374644›Full record

ArticleMolecular cell2008

WHEP domains direct noncanonical function of glutamyl-Prolyl tRNA synthetase in translational control of gene expression.

Jie Jia, Abul Arif, Partho S Ray, Paul L Fox

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 119 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. AKT-dependent nuclear localization of EPRS1 activates PARP1 in breast cancer cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Tryptophanyl-tRNA Synthetase as a Potential Therapeutic Target.International journal of molecular sciences · 2021
    Review
  15. Article
  16. Article
  17. Article
  18. Aminoacyl-tRNA synthetases.RNA (New York, N.Y.) · 2020
    Review
  19. Aminoacyl-tRNA synthetases as therapeutic targets.Nature reviews. Drug discovery · 2019
    Review
  20. Review

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jie JiaDepartment of Cell Biology, The Lerner Research Institute, Cleveland Clinic, 9500 Euclid Avenue, Cleveland, OH 44195, USA.
Abul Arif
Partho S Ray
Paul L Fox
Cleveland Clinic Lerner College of Medicine · US

Funding

Vascular Cell function and AtherosclerosisP01HL029582 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI FOX, PAUL L · 1985 to 2019
$32.0M
Structural Determinants Of Ceruloplasmin Inflammatory ActivityP01HL076491 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI PLOW, EDWARD FRANKLIN · 2004 to 2019
$27.3M
ROLE OF CERULOPLASMIN IN IRON METABOLISM AND OVERLOADR01HL067725 · NHLBI · CLEVELAND CLINIC LERNER COL/MED-CWRU · PI FOX, PAUL L · 2000 to 2003
$1.1M
NHLBI NIH HHS P01 HL029582NHLBI NIH HHS P01 HL076491NHLBI NIH HHS P01 HL29582NHLBI NIH HHS P01 HL76491NHLBI NIH HHS R01 HL067725NHLBI NIH HHS R01 HL67725
6 · The paper itself

Abstract

The heterotetrameric GAIT complex suppresses translation of selected mRNAs in interferon-gamma-activated monocytic cells. Specificity is dictated by glutamyl-prolyl tRNA synthetase (EPRS) binding to a 3'UTR element in target mRNAs. EPRS consists of two synthetase cores joined by a linker containing three WHEP domains of unknown function. Here we show the critical role of EPRS WHEP domains in targeting and regulating GAIT complex binding to RNA. The upstream WHEP pair directs high-affinity binding to GAIT element-bearing mRNAs, while the overlapping, downstream pair binds NSAP1, which inhibits mRNA binding. Interaction of EPRS with ribosomal protein L13a and GAPDH induces a conformational switch that rescues mRNA binding and restores translational control. Total reconstitution from purified components indicates that the four GAIT proteins are necessary and sufficient for self-assembly of a functional complex. Our results establish the essentiality of WHEP domains in the noncanonical function of EPRS in regulating inflammatory gene expression.

Indexed as

Gene Expression RegulationProtein Biosynthesis3' Untranslated RegionsAmino Acyl-tRNA SynthetasesBinding SitesGlyceraldehyde-3-Phosphate DehydrogenasesHumansInflammationKineticsMacromolecular SubstancesMonocytesRibosomal Protein L3Ribosomal ProteinsRNA-Binding ProteinsRNA, MessengerTranscription, Genetic3' Untranslated RegionsAmino Acyl-tRNA Synthetasesglutamyl-prolyl-tRNA synthetaseGlyceraldehyde-3-Phosphate DehydrogenasesMacromolecular SubstancesRibosomal Protein L3Ribosomal ProteinsRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID18374644
PMCPMC2819395
OpenAlexW2020085353

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.