Evidence map›Paper›PMID 18369369›Full record

ArticleEMBO reports2008

'Insulator bodies' are aggregates of proteins but not of insulators.

Anton Golovnin, Larisa Melnikova, Ilya Volkov, Margarita Kostuchenko, Alexander V Galkin, Pavel Georgiev

Open access · bronzeAbstract read
In one paragraph

Article in EMBO reports, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 60 citations in OpenAlex.

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  8. The zinc-finger protein CLAMP promotesJournal of cell science · 2019
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  14. Epigenetics & chromatin · 2017
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Anton GolovninDepartment of the Control of Genetic Processes, Institute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilov Street, Moscow 119334, Russia.
Larisa Melnikova
Ilya Volkov
Margarita Kostuchenko
Alexander V Galkin
Pavel Georgiev
Institute of Gene Biology · RUEngelhardt Institute of Molecular Biology · RU

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Chromatin insulators are thought to restrict the action of enhancers and silencers. The best-known insulators in Drosophila require proteins such as Suppressor of Hairy wing (Su(Hw)) and Modifier of mdg4 (Mod(mdg4)) to be functional. The insulator-related proteins apparently colocalize as nuclear speckles in immunostained cells. It has been asserted that these speckles are 'insulator bodies' of many Su(Hw)-insulator DNA sites held together by associated proteins, including Mod(mdg4). As we show here using flies, larvae and S2 cells, a mutant Mod(mdg4) protein devoid of the Q-rich domain supports the function of Su(Hw)-dependent insulators and efficiently binds to correct insulator sites on the chromosome, but does not form or enter the Su(Hw)-marked nuclear speckles; conversely, the latter accumulate another (C-truncated) Mod(mdg4) mutant that cannot interact with Su(Hw) or with the genuine insulators. Hence, it is not the functional genomic insulators but rather aggregated proteins that make the so-called 'insulator bodies'.

Indexed as

Insulator ElementsAllelesAnimalsDNA-Binding ProteinsDrosophilaDrosophila ProteinsEmbryo, NonmammalianImmunohistochemistryLarvaMaleMutationNuclear ProteinsProtein Structure, TertiaryRecombinant ProteinsRepressor ProteinsTranscription FactorsDNA-Binding ProteinsDrosophila Proteinsmdg4 protein (gypsy)Nuclear ProteinsRecombinant ProteinsRepressor Proteinssu(Hw) protein, DrosophilaTranscription Factors

Identifiers

PMID18369369
PMCPMC2373365
OpenAlexW2156376634

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.