Evidence map›Paper›PMID 18369195›Full record

ArticleProtein science : a publication of the Protein Society2008

Structure and ion channel activity of the human respiratory syncytial virus (hRSV) small hydrophobic protein transmembrane domain.

Siok Wan Gan, Lifang Ng, Xin Lin, Xiandi Gong, Jaume Torres

Abstract read
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Article in Protein science : a publication of the Protein Society, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

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0cells of the map it votes in
43citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

43 citing papers in PubMed.

  1. Article
  2. Review
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  7. Article
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  9. Review
  10. Review
  11. Article
  12. Human Respiratory Syncytial Virus: Infection and Pathology.Seminars in respiratory and critical care medicine · 2016
    Review
  13. Targeting the Channel Activity of Viroporins.Advances in protein chemistry and structural biology · 2016
    Review
  14. Review
  15. Article
  16. Novel antigens for RSV vaccines.Current opinion in immunology · 2015
    Review
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Siok Wan GanSchool of Biological Sciences, Nanyang Technological University, 637551 Singapore.
Lifang Ng
Xin Lin
Xiandi Gong
Jaume Torres

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The small hydrophobic (SH) protein from the human respiratory syncytial virus (hRSV) is a glycoprotein of approximately 64 amino acids with one putative alpha-helical transmembrane domain. Although SH protein is important for viral infectivity, its exact role during viral infection is not clear. Herein, we have studied the secondary structure, orientation, and oligomerization of the transmembrane domain of SH (SH-TM) in the presence of lipid bilayers. Only one oligomer, a pentamer, was observed in PFO-PAGE. Using polarized attenuated total reflection-Fourier transform infrared (PATR-FTIR) spectroscopy, we show that the SH-TM is alpha-helical. The rotational orientation of SH-TM was determined by site-specific infrared dichroism (SSID) at two consecutive isotopically labeled residues. This orientation is consistent with that of an evolutionary conserved pentameric model obtained from a global search protocol using 13 homologous sequences of RSV. Conductance studies of SH-TM indicate ion channel activity, which is cation selective, and inactive below the predicted pK(a) of histidine. Thus, our results provide experimental evidence that the transmembrane domain of SH protein forms pentameric alpha-helical bundles that form cation-selective ion channels in planar lipid bilayers. We provide a model for this pore, which should be useful in mutagenesis studies to elucidate its role during the virus cycle.

Indexed as

Amino Acid SequenceCationsElectrophoresis, Polyacrylamide GelHumansHydrogen BondingIon ChannelsLipid BilayersModels, MolecularMolecular Sequence DataProtein Structure, SecondaryProtein Structure, TertiaryRespiratory Syncytial Virus, HumanRetroviridae Proteins, OncogenicSpectroscopy, Fourier Transform InfraredCationsIon ChannelsLipid BilayersRetroviridae Proteins, Oncogenicsmall hydrophobic protein, virus

Identifiers

PMID18369195
PMCPMC2327286

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.