Evidence map›Paper›PMID 18369189›Full record

ArticleProtein science : a publication of the Protein Society2008

Structure and ligand binding of the soluble domain of a Thermotoga maritima membrane protein of unknown function TM1634.

Clare J McCleverty, Linda Columbus, Andreas Kreusch, Scott A Lesley

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Clare J McClevertyThe Genomics Institute of the Novartis Research Foundation, San Diego, California 92121, USA.
Linda Columbus
Andreas Kreusch
Scott A Lesley
Genomics Institute of the Novartis Research Foundation · USJoint Center for Structural Genomics · USScripps Research Institute · US

Funding

Technology Evaluation CoreU54GM074898 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI STEVENS, RAYMOND C · 2005 to 2009
$50.6M
JOINT CENTER FOR STRUCTURAL GENOMICSP50GM062411 · NIGMS · SCRIPPS RESEARCH INSTITUTE · PI WILSON, IAN A · 2000 to 2004
$32.9M
NMR Structure of Membrane Proteins of T. maritimaF32GM068286 · NIGMS · SCRIPPS RESEARCH INSTITUTE · PI COLUMBUS, LINDA M · 2003 to 2005
$139k
NIGMS NIH HHS 1F32GM068286NIGMS NIH HHS F32 GM068286NIGMS NIH HHS P50 GM062411NIGMS NIH HHS P50 GM62411NIGMS NIH HHS U54 GM074898
6 · The paper itself

Abstract

As a part of the Joint Center for Structural Genomics (JCSG) biological targets, the structures of soluble domains of membrane proteins from Thermotoga maritima were pursued. Here, we report the crystal structure of the soluble domain of TM1634, a putative membrane protein of 128 residues (15.1 kDa) and unknown function. The soluble domain of TM1634 is an alpha-helical dimer that contains a single tetratrico peptide repeat (TPR) motif in each monomer where each motif is similar to that found in Tom20. The overall fold, however, is unique and a DALI search does not identify similar folds beyond the 38-residue TPR motif. Two different putative ligand binding sites, in which PEG200 and Co(2+) were located, were identified using crystallography and NMR, respectively.

Indexed as

Amino Acid SequenceBacterial ProteinsBinding SitesCobaltCrystallography, X-RayDimerizationLigandsMembrane ProteinsModels, MolecularMolecular Sequence DataNuclear Magnetic Resonance, BiomolecularPolyethylene GlycolsProtein Structure, SecondaryProtein Structure, TertiarySequence DeletionSolubilityBacterial ProteinsCobaltLigandsMembrane ProteinsPolyethylene Glycols

Identifiers

PMID18369189
PMCPMC2327271
OpenAlexW2058427811

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.