Evidence map›Paper›PMID 18367207›Full record

ArticleJournal of molecular biology2008

Peptide-based interactions with calnexin target misassembled membrane proteins into endoplasmic reticulum-derived multilamellar bodies.

Vladimir M Korkhov, Laura Milan-Lobo, Benoît Zuber, Hesso Farhan, Johannes A Schmid, Michael Freissmuth, Harald H Sitte

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. A transporter's doom or destiny:Frontiers in molecular neuroscience · 2024
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  3. Article
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  5. Review
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  7. Article
  8. Review
  9. Article
  10. Review
  11. An unfolding story: Small molecules remedy misfolded monoamine transporters.The international journal of biochemistry & cell biology · 2017
    Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Vladimir M KorkhovInstitute of Pharmacology, Center of Biomolecular Medicine and Pharmacology, Medical University Vienna, Waehringer Strasse 13a, A-1090 Vienna, Austria.
Laura Milan-Lobo
Benoît Zuber
Hesso Farhan
Johannes A Schmid
Michael Freissmuth
Harald H Sitte
Medical University of Vienna · ATMRC Laboratory of Molecular Biology · GB

Funding

Medical Research Council MC_U105184294
6 · The paper itself

Abstract

Oligomeric assembly of neurotransmitter transporters is a prerequisite for their export from the endoplasmic reticulum (ER) and their subsequent delivery to the neuronal synapse. We previously identified mutations, e.g., in the gamma-aminobutyric acid (GABA) transporter-1 (GAT1), which disrupted assembly and caused retention of the transporter in the ER. Using one representative mutant, GAT1-E101D, we showed here that ER retention was due to association of the transporter with the ER chaperone calnexin: interaction with calnexin led to accumulation of GAT1 in concentric bodies corresponding to previously described multilamellar ER-derived structures. The transmembrane domain of calnexin was necessary and sufficient to direct the protein into these concentric bodies. Both yellow fluorescent protein-tagged versions of wild-type GAT1 and of the GAT1-E101D mutant remained in disperse (i.e., non-aggregated) form in these concentric bodies, because fluorescence recovered rapidly (t(1/2) approximately 500 ms) upon photobleaching. Fluorescence energy resonance transfer microscopy was employed to visualize a tight interaction of GAT1-E101D with calnexin. Recognition by calnexin occurred largely in a glycan-independent manner and, at least in part, at the level of the transmembrane domain. Our findings are consistent with a model in which the transmembrane segment of calnexin participates in chaperoning the inter- and intramolecular arrangement of hydrophobic segment in oligomeric proteins.

Indexed as

CalciumCalnexinCell MembraneEndoplasmic ReticulumFluorescence Recovery After PhotobleachingFluorescence Resonance Energy TransferGABA Plasma Membrane Transport ProteinsGlucosidasesHumansLectinsMembrane GlycoproteinsMolecular ChaperonesPeptidesProtein FoldingProtein Structure, TertiaryViral Envelope ProteinsCalciumCalnexinGABA Plasma Membrane Transport ProteinsGlucosidasesG protein, vesicular stomatitis virusLectinsMembrane GlycoproteinsMolecular ChaperonesPeptidesSLC6A1 protein, humanViral Envelope Proteins

Identifiers

PMID18367207
PMCPMC4493858
OpenAlexW2006630717

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.