Evidence map›Paper›PMID 18366814›Full record

ArticleBMC immunology2008

Precision and linearity targets for validation of an IFNgamma ELISPOT, cytokine flow cytometry, and tetramer assay using CMV peptides.

Holden T Maecker, Jeffrey Hassler, Janice K Payne, Amanda Summers, Karrie Comatas, Manar Ghanayem, Michael A Morse, Timothy M Clay, Herbert K Lyerly, Sonny Bhatia and 4 more

Abstract read
In one paragraph

Article in BMC immunology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Important Considerations for ELISpot Validation.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
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  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Holden T MaeckerBD Biosciences, San Jose, CA, USA. holden_maecker@sbcglobal.net
Jeffrey Hassler
Janice K Payne
Amanda Summers
Karrie Comatas
Manar Ghanayem
Michael A Morse
Timothy M Clay
Herbert K Lyerly
Sonny Bhatia
Smita A Ghanekar
Vernon C Maino
Corazon Delarosa
Mary L Disis

Funding

Immunologic Correlates of Immunization for CancerU54CA090818 · NCI · UNIVERSITY OF WASHINGTON · PI DISIS, MARY L. · 2001 to 2006
$5.5M
NCI NIH HHS U54 CA090818
6 · The paper itself

Abstract

backgroundSingle-cell assays of immune function are increasingly used to monitor T cell responses in immunotherapy clinical trials. Standardization and validation of such assays are therefore important to interpretation of the clinical trial data. Here we assess the levels of intra-assay, inter-assay, and inter-operator precision, as well as linearity, of CD8+ T cell IFNgamma-based ELISPOT and cytokine flow cytometry (CFC), as well as tetramer assays.

resultsPrecision was measured in cryopreserved PBMC with a low, medium, or high response level to a CMV pp65 peptide or peptide mixture. Intra-assay precision was assessed using 6 replicates per assay; inter-assay precision was assessed by performing 8 assays on different days; and inter-operator precision was assessed using 3 different operators working on the same day. Percent CV values ranged from 4% to 133% depending upon the assay and response level. Linearity was measured by diluting PBMC from a high responder into PBMC from a non-responder, and yielded R2 values from 0.85 to 0.99 depending upon the assay and antigen.

conclusionThese data provide target values for precision and linearity of single-cell assays for those wishing to validate these assays in their own laboratories. They also allow for comparison of the precision and linearity of ELISPOT, CFC, and tetramer across a range of response levels. There was a trend toward tetramer assays showing the highest precision, followed closely by CFC, and then ELISPOT; while all three assays had similar linearity. These findings are contingent upon the use of optimized protocols for each assay.

Indexed as

CytomegalovirusEnzyme-Linked Immunosorbent AssayFlow CytometryHumansInterferon-gammaPeptidesReproducibility of ResultsTissue DonorsViral ProteinsInterferon-gammaPeptidesViral Proteins

Identifiers

PMID18366814
PMCPMC2275721

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.