ArticleBMC genomics2008
An anatomy ontology to represent biological knowledge in Dictyostelium discoideum.
Article in BMC genomics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
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Who cites it
24 citing papers in PubMed.
- The Gene Ontology knowledgebase in 2026.Nucleic acids research · 2026Article
- Photobehaviours guided by simple photoreceptor systems.Animal cognition · 2023Review
- Visualization of c-di-GMP in multicellularFrontiers in cell and developmental biology · 2023Article
- The Cellular and Developmental Roles of Cullins, Neddylation, and the COP9 Signalosome inFrontiers in physiology · 2022Review
- Reactome and the Gene Ontology: digital convergence of data resources.Bioinformatics (Oxford, England) · 2021Article
- Planarian Anatomy Ontology: a resource to connect data within and across experimental platforms.Development (Cambridge, England) · 2021Article
- Article
- dictyBase and the Dicty Stock Center (version 2.0) - a progress report.The International journal of developmental biology · 2019Review
- dictyBase 2015: Expanding data and annotations in a new software environment.Genesis (New York, N.Y. : 2000) · 2015Article
- Ontology for the asexual development and anatomy of the colonial chordate Botryllus schlosseri.PloS one · 2014Article
- A SAP domain-containing protein shuttles between the nucleus and cell membranes and plays a role in adhesion and migration in D. discoideum.Biology open · 2013Article
- One stop shop for everything Dictyostelium: dictyBase and the Dicty Stock Center in 2012.Methods in molecular biology (Clifton, N.J.) · 2013Article
- An orthologue of the Myelin-gene Regulatory Transcription Factor regulates Dictyostelium prestalk differentiation.The International journal of developmental biology · 2012Article
- Copine A is expressed in prestalk cells and regulates slug phototaxis and thermotaxis in developing Dictyostelium.Development, growth & differentiation · 2011Article
- DIF-1 regulates Dictyostelium basal disc differentiation by inducing the nuclear accumulation of a bZIP transcription factor.Developmental biology · 2011Article
- A Dictyostelium SH2 adaptor protein required for correct DIF-1 signaling and pattern formation.Developmental biology · 2011Article
- Combinatorial cell-specific regulation of GSK3 directs cell differentiation and polarity in Dictyostelium.Development (Cambridge, England) · 2011Article
- A SET/MYND chromatin re-modelling protein regulates Dictyostelium prespore patterning.The International journal of developmental biology · 2011Article
- Redundant and unique roles of coronin proteins in Dictyostelium.Cellular and molecular life sciences : CMLS · 2011Article
- Dictyostelium finds new roles to model.Genetics · 2010Review
Corrections and comments
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Authors and funding
4 authors.
Funding
Abstract
backgroundDictyostelium discoideum is a model system for studying many important physiological processes including chemotaxis, phagocytosis, and signal transduction. The recent sequencing of the genome has revealed the presence of over 12,500 protein-coding genes. The model organism database dictyBase hosts the genome sequence as well as a large amount of manually curated information.
resultsWe present here an anatomy ontology for Dictyostelium based upon the life cycle of the organism.
conclusionAnatomy ontologies are necessary to annotate species-specific events such as phenotypes, and the Dictyostelium anatomy ontology provides an essential tool for curation of the Dictyostelium genome.
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Registered trials
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