Evidence map›Paper›PMID 18359863›Full record

ArticleProtein science : a publication of the Protein Society2008

Quantitative analysis of multi-protein interactions using FRET: application to the SUMO pathway.

Sarah F Martin, Michael H Tatham, Ronald T Hay, Ifor D W Samuel

Abstract readValidation Study
In one paragraph

Article in Protein science : a publication of the Protein Society, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Article
  2. Ubiquitination detection techniques.Experimental biology and medicine (Maywood, N.J.) · 2023
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Generation of a Quantitative Luciferase Reporter for Sox9 SUMOylation.International journal of molecular sciences · 2020
    Article
  9. Article
  10. Article
  11. Article
  12. Structural insights into enzymatic [4+2]Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Sarah F MartinBiophotonics Collaboration, School of Physics and Astronomy, University of St. Andrews, St. Andrews KY16 9SS, United Kingdom.
Michael H Tatham
Ronald T Hay
Ifor D W Samuel

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein-protein binding and signaling pathways are important fields of biomedical science. Here we report simple optical methods for the determination of the equilibrium binding constant K(d) of protein-protein interactions as well as quantitative studies of biochemical cascades. The techniques are based on steady-state and time-resolved fluorescence resonance energy transfer (FRET) between ECFP and Venus-YFP fused to proteins of the SUMO family. Using FRET has several advantages over conventional free-solution techniques such as isothermal titration calorimetry (ITC): Concentrations are determined accurately by absorbance, highly sensitive binding signals enable the analysis of small quantities, and assays are compatible with multi-well plate format. Most importantly, our FRET-based techniques enable us to measure the effect of other molecules on the binding of two proteins of interest, which is not straightforward with other approaches. These assays provide powerful tools for the study of competitive biochemical cascades and the extent to which drug candidates modify protein interactions.

Indexed as

AnimalsFluorescence Resonance Energy TransferGreen Fluorescent ProteinsKineticsLuminescent ProteinsMiceMolecular ChaperonesNuclear Pore Complex ProteinsProtein Interaction MappingSignal TransductionSUMO-1 ProteinUbiquitin-Conjugating EnzymesUbiquitin-Conjugating Enzyme UBC9Cyan Fluorescent ProteinGreen Fluorescent ProteinsLuminescent ProteinsMolecular ChaperonesNuclear Pore Complex Proteinsran-binding protein 2SUMO-1 ProteinUbiquitin-Conjugating EnzymesUbiquitin-Conjugating Enzyme UBC9

Identifiers

PMID18359863
PMCPMC2271167

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.