Evidence map›Paper›PMID 18359813›Full record

ArticleJournal of bacteriology2008

Regulation of gene expression in a mixed-genus community: stabilized arginine biosynthesis in Streptococcus gordonii by coaggregation with Actinomyces naeslundii.

Nicholas S Jakubovics, Steven R Gill, Stacey E Iobst, M M Vickerman, Paul E Kolenbrander

Abstract read
In one paragraph

Article in Journal of bacteriology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Identification ofmBio · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. AIMS microbiology · 2023
    Review
  11. Article
  12. The Regulatory Effect of Coaggregation BetweenFrontiers in cellular and infection microbiology · 2022
    Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Review
  18. Article
  19. Microorganisms · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nicholas S JakubovicsNational Institutes of Health/NIDCR, Building 30, Room 310, 30 Convent Drive, Bethesda, MD 20892-4350, USA.
Steven R Gill
Stacey E Iobst
M M Vickerman
Paul E Kolenbrander

Funding

Interactions Between Actinomyces And Other BacteriaZ01DE000273 · NIDCR · NATIONAL INSTITUTE OF DENTAL & CRANIOFACIAL RESEARCH · PI KOLENBRANDER, PAUL E · 1985 to 2008
$1.9M
REGULATION OF STREPTOCOCCUS GORDONII GLUCOSYLTRANSFERASER01DE011090 · NIDCR · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI VICKERMAN, M MARGARET · 2000 to 2004
$1.5M
REGULATION OF STREPTOCOCCUS GORDONII GLUCOSYLTRANSFERASER29DE011090 · NIDCR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI VICKERMAN, M MARGARET · 1995 to 1999
–
REGULATION OF STREPTOCOCCUS GORDONII GLUCOSYLTRANSFERASER55DE011090 · NIDCR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI VICKERMAN, M MARGARET · 1994 to 1994
–
Intramural NIH HHSNIDCR NIH HHS DE11090NIDCR NIH HHS R01 DE011090NIDCR NIH HHS R29 DE011090
6 · The paper itself

Abstract

Interactions involving genetically distinct bacteria, for example, between oral streptococci and actinomyces, are central to dental plaque development. A DNA microarray identified Streptococcus gordonii genes regulated in response to coaggregation with Actinomyces naeslundii. The expression of 23 genes changed >3-fold in coaggregates, including that of 9 genes involved in arginine biosynthesis and transport. The capacity of S. gordonii to synthesize arginine was assessed using a chemically defined growth medium. In monoculture, streptococcal arginine biosynthesis was inefficient and streptococci could not grow aerobically at low arginine concentrations. In dual-species cultures containing coaggregates, however, S. gordonii grew to high cell density at low arginine concentrations. Equivalent cocultures without coaggregates showed no growth until coaggregation was evident (9 h). An argH mutant was unable to grow at low arginine concentrations with or without A. naeslundii, indicating that arginine biosynthesis was essential for coaggregation-induced streptococcal growth. Using quantitative reverse transcriptase PCR, the expression of argC, argG, and pyrA(b) was strongly (10- to 100-fold) up-regulated in S. gordonii monocultures after 3 h of growth when exogenous arginine was depleted. Cocultures without induced coaggregation showed similar regulation. However, within 1 h after coaggregation with A. naeslundii, the expression of argC, argG, and pyrA(b) in S. gordonii was partially up-regulated although arginine was plentiful, and mRNA levels did not increase further when arginine was diminished. Thus, A. naeslundii stabilizes S. gordonii expression of arginine biosynthesis genes in coaggregates but not cocultures and enables aerobic growth when exogenous arginine is limited.

Indexed as

Bacterial AdhesionActinomycesAdhesins, BacterialArginineBiofilmsDental PlaqueMouthReceptor AggregationStreptococcus gordoniiAdhesins, BacterialArginine

Identifiers

PMID18359813
PMCPMC2395002

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.