Evidence map›Paper›PMID 18359281›Full record

ArticleArchives of biochemistry and biophysics2008

Suppression of metabolic defects of yeast isocitrate dehydrogenase and aconitase mutants by loss of citrate synthase.

An-Ping Lin, Kevin W Hakala, Susan T Weintraub, Lee McAlister-Henn

Open access · greenAbstract read
In one paragraph

Article in Archives of biochemistry and biophysics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Cardiolipin-deficient cells depend on anaplerotic pathways to ameliorate defective TCA cycle function.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2019
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Redox responses in yeast to acetate as the carbon source.Archives of biochemistry and biophysics · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

An-Ping LinDepartment of Biochemistry, University of Texas Health Science Center, 7703 Floyd Curl Dr., San Antonio, TX 78229-3900, USA.
Kevin W Hakala
Susan T Weintraub
Lee McAlister-Henn
The University of Texas Health Science Center at San Antonio · US

Funding

TISSUE CULTURE---COREP30CA054174 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Lei Zheng · 1991 to 2026
$59.1M
MOLECULAR GENETICS OF ISOCITRATE DEHYDROGENASESR01GM051265 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI MCALISTER-HENN, LEE · 1994 to 2011
$3.3M
CYTOSOLIC SOURCES OF NADPH AS ANTIOXIDANTSR01AG017477 · NIA · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI MCALISTER-HENN, LEE · 2000 to 2009
$2.1M
NCI NIH HHS 7P30CA54174NCI NIH HHS P30 CA054174NIA NIH HHS AG017477NIA NIH HHS R01 AG017477NIGMS NIH HHS GM051265NIGMS NIH HHS R01 GM051265
6 · The paper itself

Abstract

Yeast mutants lacking mitochondrial NAD(+)-specific isocitrate dehydrogenase (idhDelta) or aconitase (aco1Delta) were found to share several growth phenotypes as well as patterns of specific protein expression that differed from the parental strain. These shared properties of idhDelta and aco1Delta strains were eliminated or moderated by co-disruption of the CIT1 gene encoding mitochondrial citrate synthase. Gas chromatography/mass spectrometry analyses indicated a particularly dramatic increase in cellular citrate levels in idhDelta and aco1Delta strains, whereas citrate levels were substantially lower in idhDeltacit1Delta and aco1Deltacit1Delta strains. Exogenous addition of citrate to parental strain cultures partially recapitulated effects of high endogenous levels of citrate in idhDelta and aco1Delta strains. Finally, effects of elevated cellular citrate in idhDelta and aco1Delta mutant strains were partially alleviated by addition of iron or by an increase in pH of the growth medium, suggesting that detrimental effects of citrate are due to elevated levels of the ionized form of this metabolite.

Indexed as

Aconitate HydrataseBlotting, WesternCitrate (si)-SynthaseGas Chromatography-Mass SpectrometryIsocitrate DehydrogenaseMutationSaccharomyces cerevisiaeAconitate HydrataseCitrate (si)-SynthaseIsocitrate Dehydrogenase

Identifiers

PMID18359281
PMCPMC2459229
OpenAlexW2103997277

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.