Evidence map›Paper›PMID 18357469›Full record

ArticleHuman genetics2008

The human gamma-glutamyltransferase gene family.

Nora Heisterkamp, John Groffen, David Warburton, Tam P Sneddon

Abstract read
PubMed Publisher
In one paragraph

Article in Human genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed, 2 pooled it
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 2 syntheses or guidelines pooled it, 154 citations in OpenAlex.

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27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Nora HeisterkampDivision of Hematology/Oncology, The Saban Research Institute of Childrens Hospital, Los Angeles, CA 90027, USA. heisterk@hsc.usc.edu
John Groffen
David Warburton
Tam P Sneddon
Children's Hospital of Los Angeles · USUniversity College London · GB

Funding

TGF BETA SIGNALING IN LUNG MORPHOGENESIS, INJURY AND REPAIRP01HL060231 · NHLBI · CHILDREN'S HOSPITAL OF LOS ANGELES · PI HEISTERKAMP, NORA C · 1998 to 2009
$14.5M
The Nomenclature of Human GenesP41HG003345 · NHGRI · UNIVERSITY COLLEGE LONDON · PI BIRNEY, EWAN · 2004 to 2012
$3.4M
NEGATIVE REGULATORS OF LUNG INFLAMMATIONR01HL071945 · NHLBI · CHILDREN'S HOSPITAL OF LOS ANGELES · PI GROFFEN, JOHN H · 2003 to 2006
$1.5M
Medical Research CouncilNHGRI NIH HHS P41 HG 003345NHLBI NIH HHS HL060231NHLBI NIH HHS HL071945Wellcome Trust
6 · The paper itself

Abstract

Assays for gamma-glutamyl transferase (GGT1, EC 2.3.2.2) activity in blood are widely used in a clinical setting to measure tissue damage. The well-characterized GGT1 is an extracellular enzyme that is anchored to the plasma membrane of cells. There, it hydrolyzes and transfers gamma-glutamyl moieties from glutathione and other gamma-glutamyl compounds to acceptors. As such, it has a critical function in the metabolism of glutathione and in the conversion of the leukotriene LTC4 to LTD4. GGT deficiency in man is rare and for the few patients reported to date, mutations in GGT1 have not been described. These patients do secrete glutathione in urine and fail to metabolize LTC4. Earlier pre-genome investigations had indicated that besides GGT1, the human genome contains additional related genes or sequences. These sequences were given multiple different names, leading to inconsistencies and confusion. Here we systematically evaluated all human sequences related to GGT1 using genomic and cDNA database searches and identified thirteen genes belonging to the extended GGT family, of which at least six appear to be active. In collaboration with the HUGO Gene Nomenclature Committee (HGNC) we have designated possible active genes with nucleotide or amino acid sequence similarity to GGT1, as GGT5 (formerly GGL, GGTLA1/GGT-rel), GGT6 (formerly rat ggt6 homologue) and GGT7 (formerly GGTL3, GGT4). Two loci have the potential to encode only the light chain portion of GGT and have now been designated GGTLC1 (formerly GGTL6, GGTLA4) and GGTLC2. Of the five full-length genes, three lack of significant nucleotide sequence homology but have significant (GGT5, GGT7) or very limited (GGT6) amino acid similarity to GGT1 and belong to separate families. GGT6 and GGT7 have not yet been described, raising the possibility that leukotriene synthesis, glutathione metabolism or gamma-glutamyl transfer is regulated by their, as of yet uncharacterized, enzymatic activities. In view of the widespread clinical use of assays that measure gamma-glutamyl transfer activity, this would appear to be of significant interest.

Indexed as

Multigene FamilyAmino Acid SequenceAnimalsDatabases, GeneticExpressed Sequence TagsFemalegamma-GlutamyltransferaseGene ExpressionGenome, HumanHumansMaleMiceMice, KnockoutMolecular Sequence DataPhylogenyRNA, Messengergamma-GlutamyltransferaseRNA, Messenger

Identifiers

PMID18357469
OpenAlexW2002941616

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.