Evidence map›Paper›PMID 18347062›Full record

ArticleMolecular and cellular biology2008

Requirement of the tissue-restricted homeodomain transcription factor Nkx6.3 in differentiation of gastrin-producing G cells in the stomach antrum.

Michael Y Choi, Anthony I Romer, Yang Wang, Melissa P Wu, Susumu Ito, Andrew B Leiter, Ramesh A Shivdasani

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  3. Genome writing and Targeted Delivery of thebioRxiv : the preprint server for biology · 2026
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  6. Review
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  10. Article
  11. Review
  12. Article
  13. Article
  14. Mechanisms of embryonic stomach development.Seminars in cell & developmental biology · 2017
    Review
  15. Stomach Organ and Cell Lineage Differentiation: from Embryogenesis to Adult Homeostasis.Cellular and molecular gastroenterology and hepatology · 2016
    Article
  16. Article
  17. Stomach development, stem cells and disease.Development (Cambridge, England) · 2016
    Review
  18. Inactivation of NKX6.3 in the stomach leads to abnormal expression of CDX2 and SOX2 required for gastric-to-intestinal transdifferentiation.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2016
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Michael Y ChoiDana-Farber Cancer Institute, 44 Binney Street, Boston, MA 02115, USA.
Anthony I Romer
Yang Wang
Melissa P Wu
Susumu Ito
Andrew B Leiter
Ramesh A Shivdasani
Harvard University · USDana-Farber Cancer Institute · USMassachusetts General Hospital · USTufts University · USUniversity of Massachusetts Chan Medical School · US

Funding

CELL-SPECIFIC REGULATION OF SECRETIN GENE EXPRESSIONR01DK043673 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LEITER, ANDREW B · 1992 to 2007
$3.4M
Cell-fate of gastrointestinal endocrine cellsR01DK067166 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LEITER, ANDREW B. · 2004 to 2008
$1.9M
Gene expression in the mammalian intestineR01DK061139 · NIDDK · DANA-FARBER CANCER INSTITUTE · PI SHIVDASANI, RAMESH A · 2002 to 2007
$1.3M
NIDDK NIH HHS R01 DK043673NIDDK NIH HHS R01 DK061139NIDDK NIH HHS R01 DK067166NIDDK NIH HHS R01DK43673NIDDK NIH HHS R01DK61139NIDDK NIH HHS R01DK67166
6 · The paper itself

Abstract

Many homeodomain transcription factors function in organogenesis and cell differentiation. The Nkx family illustrates these functions especially well, and the Nkx6 subfamily controls differentiation in the central nervous system and pancreas. Nkx6.3, a recent addition to this subfamily, overlaps Nkx6.1 and Nkx6.2 in expression in the hindbrain and stomach. Nkx6.3 transcripts localize in the epithelium of the most distal stomach region, the antrum and pylorus; expression in the adult intestine is lower and confined to the proximal duodenum. Nkx6.3(-)(/)(-) mice develop and grow normally, with a grossly intact stomach and duodenum. These mice show markedly reduced gastrin mRNA, many fewer gastrin-producing (G) cells in the stomach antrum, hypogastrinemia, and increased stomach luminal pH, with a corresponding increase in somatostatin mRNA levels and antral somatostatin-producing (D) cells. They express normal levels of other transcription factors required for gastric endocrine cell differentiation, Pdx1, Pax6, and Ngn3; conversely, Ngn3(-)(/)(-) mice, which also show reduced gastrin levels, express Nkx6.3 normally. These studies implicate Nkx6.3 as a selective regulator of G- and D-cell lineages, which are believed to derive from a common progenitor, and suggest that it operates in parallel with Ngn3.

Indexed as

AnimalsBase SequenceCell DifferentiationDNA PrimersGastrin-Secreting CellsGene ExpressionGene TargetingHomeodomain ProteinsMiceMice, Inbred C57BLMice, KnockoutPyloric AntrumRNA, MessengerTranscription FactorsDNA PrimersHomeodomain ProteinsRNA, MessengerTranscription Factors

Identifiers

PMID18347062
PMCPMC2423174
OpenAlexW1968157728

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.