Evidence map›Paper›PMID 18344421›Full record

ArticlePlant physiology2008

Cell wall modifications in Arabidopsis plants with altered alpha-L-arabinofuranosidase activity.

Ricardo A Chávez Montes, Philippe Ranocha, Yves Martinez, Zoran Minic, Lise Jouanin, Mélanie Marquis, Luc Saulnier, Lynette M Fulton, Christopher S Cobbett, Frédérique Bitton and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
9.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 71 citations in OpenAlex.

  1. Identification of miR171a-International journal of molecular sciences · 2025
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  3. Map-based cloning of Zmccr3 and its network construction and validation for regulating maize seed germination.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  4. Article
  5. Article
  6. ThePlants (Basel, Switzerland) · 2022
    Article
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  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Metabolism of L-arabinose in plants.Journal of plant research · 2016
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Ricardo A Chávez MontesUMR 5546, CNRS-Université Paul Sabatier, Surfaces Cellulaires et Signalisation chez les Végétaux, BP 42617 Auzeville, 31326 Castanet-Tolosan, France.
Philippe Ranocha
Yves Martinez
Zoran Minic
Lise Jouanin
Mélanie Marquis
Luc Saulnier
Lynette M Fulton
Christopher S Cobbett
Frédérique Bitton
Jean-Pierre Renou
Alain Jauneau
Deborah Goffner
Université Toulouse III - Paul Sabatier · FRThe University of Melbourne · AUBiopolymères Interactions Assemblages · FRCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although cell wall remodeling is an essential feature of plant growth and development, the underlying molecular mechanisms are poorly understood. This work describes the characterization of Arabidopsis (Arabidopsis thaliana) plants with altered expression of ARAF1, a bifunctional alpha-L-arabinofuranosidase/beta-D-xylosidase (At3g10740) belonging to family 51 glycosyl-hydrolases. ARAF1 was localized in several cell types in the vascular system of roots and stems, including xylem vessels and parenchyma cells surrounding the vessels, the cambium, and the phloem. araf1 T-DNA insertional mutants showed no visible phenotype, whereas transgenic plants that overexpressed ARAF1 exhibited a delay in inflorescence emergence and altered stem architecture. Although global monosaccharide analysis indicated only slight differences in cell wall composition in both mutant and overexpressing lines, immunolocalization experiments using anti-arabinan (LM6) and anti-xylan (LM10) antibodies indicated cell type-specific alterations in cell wall structure. In araf1 mutants, an increase in LM6 signal intensity was observed in the phloem, cambium, and xylem parenchyma in stems and roots, largely coinciding with ARAF1 expression sites. The ectopic overexpression of ARAF1 resulted in an increase in LM10 labeling in the secondary walls of interfascicular fibers and xylem vessels. The combined ARAF1 gene expression and immunolocalization studies suggest that arabinan-containing pectins are potential in vivo substrates of ARAF1 in Arabidopsis.

Indexed as

ArabidopsisArabidopsis ProteinsCell WallDNA, BacterialGene ExpressionGene Expression ProfilingGlucuronidaseImmunohistochemistryMonosaccharidesMutagenesis, InsertionalOligonucleotide Array Sequence AnalysisPhenotypePlant StemsPolysaccharidesXylosidasesarabanArabidopsis ProteinsARAf protein, ArabidopsisDNA, BacterialGlucuronidaseMonosaccharidesPolysaccharidesT-DNAXylosidases

Identifiers

PMID18344421
PMCPMC2330305
OpenAlexW1972090480

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.