Evidence map›Paper›PMID 18344406›Full record

ArticleEukaryotic cell2008

Schizosaccharomyces pombe Hst4 functions in DNA damage response by regulating histone H3 K56 acetylation.

Devyani Haldar, Rohinton T Kamakaka

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 45 citations in OpenAlex.

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  4. Systematic characterization ofFrontiers in microbiology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Devyani HaldarUnit on Chromatin and Transcription, NICHD/NIH, 18 Library Dr., Bethesda, Maryland 20892, USA. devyanih@ilsresearch.org
Rohinton T Kamakaka
Eunice Kennedy Shriver National Institute of Child Health and Human Development · USUniversity of Hyderabad · IN

Funding

Chromatin Domain DynamicsR01GM078068 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI KAMAKAKA, ROHINTON T. · 2007 to 2018
$3.7M
NIGMS NIH HHS GM078068NIGMS NIH HHS R01 GM078068
6 · The paper itself

Abstract

The packaging of eukaryotic DNA into chromatin is likely to be crucial for the maintenance of genomic integrity. Histone acetylation and deacetylation, which alter chromatin accessibility, have been implicated in DNA damage tolerance. Here we show that Schizosaccharomyces pombe Hst4, a homolog of histone deacetylase Sir2, participates in S-phase-specific DNA damage tolerance. Hst4 was essential for the survival of cells exposed to the genotoxic agent methyl methanesulfonate (MMS) as well as for cells lacking components of the DNA damage checkpoint pathway. It was required for the deacetylation of histone H3 core domain residue lysine 56, since a strain with a point mutation of its catalytic domain was unable to deacetylate this residue in vivo. Hst4 regulated the acetylation of H3 K56 and was itself cell cycle regulated. We also show that MMS treatment resulted in increased acetylation of histone H3 lysine 56 in wild-type cells and hst4Delta mutants had constitutively elevated levels of histone H3 K56 acetylation. Interestingly, the level of expression of Hst4 decreased upon MMS treatment, suggesting that the cell regulates access to the site of DNA damage by changing the level of this protein. Furthermore, we find that the phenotypes of both K56Q and K56R mutants of histone H3 were similar to those of hst4Delta mutants, suggesting that proper regulation of histone acetylation is important for DNA integrity. We propose that Hst4 is a deacetylase involved in the restoration of chromatin structure following the S phase of cell cycle and DNA damage response.

Indexed as

DNA DamageGene Expression Regulation, FungalAcetylationCell CycleCell Cycle ProteinsCodon, NonsenseDNA Repair EnzymesHistone Deacetylase InhibitorsHistone DeacetylasesHistonesLysineMutagensPhenotypeProtein Processing, Post-TranslationalSchizosaccharomycesSchizosaccharomyces pombe ProteinsCell Cycle ProteinsCodon, NonsenseDNA Repair EnzymesHistone Deacetylase InhibitorsHistone DeacetylasesHistonesHst4 protein, S pombeLysineMutagensSchizosaccharomyces pombe Proteins

Identifiers

PMID18344406
PMCPMC2394969
OpenAlexW2131458017

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.