Evidence map›Paper›PMID 18344349›Full record

ArticleApplied and environmental microbiology2008

Novel root fungal consortium associated with a dominant desert grass.

Andrea Porras-Alfaro, Jose Herrera, Robert L Sinsabaugh, Kylea J Odenbach, Timothy Lowrey, Donald O Natvig

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 231 citations in OpenAlex.

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  6. Mycorrhizal fungal communities associated with three metal accumulator plants growing in an abandoned Pb smelting factory.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2023
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  13. Characterization of Five NewJournal of fungi (Basel, Switzerland) · 2020
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2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Andrea Porras-AlfaroDepartment of Biology, MSC03 2020, 1 The University of New Mexico, Albuquerque, NM 87131-0001, USA. aporras@unm.edu
Jose Herrera
Robert L Sinsabaugh
Kylea J Odenbach
Timothy Lowrey
Donald O Natvig
University of New Mexico · USTruman State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The broad distribution and high colonization rates of plant roots by a variety of endophytic fungi suggest that these symbionts have an important role in the function of ecosystems. Semiarid and arid lands cover more than one-third of the terrestrial ecosystems on Earth. However, a limited number of studies have been conducted to characterize root-associated fungal communities in semiarid grasslands. We conducted a study of the fungal community associated with the roots of a dominant grass, Bouteloua gracilis, at the Sevilleta National Wildlife Refuge in New Mexico. Internal transcribed spacer ribosomal DNA sequences from roots collected in May 2005, October 2005, and January 2006 were amplified using fungal-specific primers, and a total of 630 sequences were obtained, 69% of which were novel (less than 97% similarity with respect to sequences in the NCBI database). B. gracilis roots were colonized by at least 10 different orders, including endophytic, coprophilous, mycorrhizal, saprophytic, and plant pathogenic fungi. A total of 51 operational taxonomic units (OTUs) were found, and diversity estimators did not show saturation. Despite the high diversity found within B. gracilis roots, the root-associated fungal community is dominated by a novel group of dark septate fungi (DSF) within the order Pleosporales. Microscopic analysis confirmed that B. gracilis roots are highly colonized by DSF. Other common orders colonizing the roots included Sordariales, Xylariales, and Agaricales. By contributing to drought tolerance and nutrient acquisition, DSF may be integral to the function of arid ecosystems.

Indexed as

BiodiversityDNA, FungalDNA, Ribosomal SpacerFungiMolecular Sequence DataNew MexicoPhylogenyPlant RootsPoaceaeSequence Analysis, DNADNA, FungalDNA, Ribosomal Spacer

Identifiers

PMID18344349
PMCPMC2394874
OpenAlexW2050084614

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.