Evidence map›Paper›PMID 18343848›Full record

ArticleThe Journal of general virology2008

Naturally arising point mutations in non-essential domains of equine infectious anemia virus Rev alter Rev-dependent nuclear-export activity.

Wendy O Sparks, Karin S Dorman, Sijun Liu, Susan Carpenter

Abstract read
In one paragraph

Article in The Journal of general virology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Wendy O SparksDepartment of Veterinary Microbiology and Preventive Medicine, Iowa State University, Ames, IA 50011, USA.
Karin S DormanDepartment of Statistics, Iowa State University, Ames, IA 50011, USA.
Sijun LiuDepartment of Veterinary Microbiology and Preventive Medicine, Iowa State University, Ames, IA 50011, USA.
Susan CarpenterDepartment of Veterinary Microbiology and Pathology, Washington State University, Pullman, WA 99164, USA.
Iowa State University · US

Funding

Strategies of lentivirus persistenceR01CA128568 · NCI · WASHINGTON STATE UNIVERSITY · PI CARPENTER, SUSAN · 2008 to 2012
$1.5M
Quasispecies Evolution During Lentivirus PersistenceR21CA097936 · NCI · IOWA STATE UNIVERSITY · PI CARPENTER, SUSAN L · 2002 to 2003
$290k
NCI NIH HHS CA97936NCI NIH HHS R01 CA128568NCI NIH HHS R21 CA097936
6 · The paper itself

Abstract

Equine infectious anemia virus (EIAV) exhibits a high rate of genetic variation in vivo, and results in a clinically variable disease in infected horses. In vivo populations of EIAV have been characterized by the presence of distinct, genetic subpopulations of Rev that differ in phenotype and fluctuate in dominance in a manner coincident with each clinical stage of disease. This study examined the specific mutations that arose in vivo and altered the phenotype. The Rev protein was found to be highly conserved, and only 10 aa mutations were observed at a frequency greater than 10 % in the sample population. Nine of these mutations were capable of significantly altering Rev activity, either as single mutations in the context of the founder variant, or in the context of cumulatively fixed mutations. The results indicated that limited genetic variation outside the essential functional domains of Rev can alter the phenotype and may confer a selective advantage in vivo.

Indexed as

Active Transport, Cell NucleusAnimalsCell NucleusEquine Infectious AnemiaGene Products, revHorsesInfectious Anemia Virus, EquinePoint MutationProtein Structure, TertiaryGene Products, rev

Identifiers

PMID18343848
PMCPMC4425282
OpenAlexW2142468184

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.