Evidence map›Paper›PMID 18341584›Full record

ArticleEnvironmental microbiology2008

Widespread distribution of a unique marine protistan lineage.

Marie L Cuvelier, Alejandra Ortiz, Eunsoo Kim, Heike Moehlig, David E Richardson, John F Heidelberg, John M Archibald, Alexandra Z Worden

Abstract read
In one paragraph

Article in Environmental microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Article
  3. Niche adaptation promoted the evolutionary diversification of tiny ocean predators.Proceedings of the National Academy of Sciences of the United States of America · 2021
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  4. Article
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  7. The rise and fall of Picobiliphytes: how assumed autotrophs turned out to be heterotrophs.BioEssays : news and reviews in molecular, cellular and developmental biology · 2014
    Article
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  16. Review
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  20. Newly identified and diverse plastid-bearing branch on the eukaryotic tree of life.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Marie L CuvelierMonterey Bay Aquarium Research Institute, 7700 Sandholdt Rd, Moss Landing, CA 95039, USA.
Alejandra Ortiz
Eunsoo Kim
Heike Moehlig
David E Richardson
John F Heidelberg
John M Archibald
Alexandra Z Worden

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Unicellular eukaryotes (protists) are key components of marine food webs, yet knowledge of their diversity, distributions and respective ecologies is limited. We investigated uncultured protists using 18S rRNA gene sequencing, phylogenetic analyses, specific fluorescence in situ hybridization (FISH) probes and other methods. Because few studies have been conducted in warm water systems, we focused on two Atlantic subtropical regions, the Sargasso Sea and the Florida Current. Cold temperate waters were also sampled. Gene sequences comprising a unique eukaryotic lineage, herein termed 'biliphytes', were identified in most samples, whether from high- (30 degrees C) or from low- (5 degrees C) temperature waters. Sequences within this uncultured group have previously been retrieved from high latitudes. Phylogenetic analyses suggest biliphytes are a sister group to the cryptophytes and katablepharids, although the relationship is not statistically supported. Bootstrap-supported subclades were delineated but coherence was not obvious with respect to geography or physicochemical parameters. Unlike results from the initial publication on these organisms (therein 'picobiliphytes'), we could not detect a nucleomorph, either visually, or by targeted primers. Phycobilin-like fluorescence associated with biliphyte-specific FISH-probed cells supports the hypothesis that they are photosynthetic. Our data indicate the biliphytes are nanoplanktonic in size, averaging 4.1 +/- 1.0 x 3.5 +/- 0.8 microm (+/-SD) for one probed group, and 3.5 +/- 0.9 x 3.0 +/- 0.9 microm (+/-SD) for another. We estimate biliphytes contributed 28 (+/-6)% of the phytoplanktonic biomass in tropical eddy-influenced surface waters. Given their broad thermal and geographic distribution, understanding the role these protists play in biogeochemical cycling within different habitats is essential.

Indexed as

AnimalsAtlantic OceanDNA PrimersDNA, ProtozoanDNA, RibosomalEukaryotaGeographyIn Situ Hybridization, FluorescenceMolecular Sequence DataPhotosynthesisPhycobilinsPhylogenyRNA, Ribosomal, 18SSeawaterSequence Analysis, DNADNA PrimersDNA, ProtozoanDNA, RibosomalPhycobilinsRNA, Ribosomal, 18S

Identifiers

PMID18341584
PMCPMC2408648

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.