ArticleGenetica2009
Characterization of new hAT transposable elements in 12 Drosophila genomes.
Article in Genetica, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed, 28 citations in OpenAlex.
- Multiple Buster transposons from hAT superfamily displaying transposition activities in mammal cells.Synthetic and systems biotechnology · 2026Article
- Interpopulation variation of transposable elements of the hAT superfamily in Drosophila willistoni (Diptera: Drosophilidae): in-situ approach.Genetics and molecular biology · 2022Article
- Phylogeny of the GenusGenetics · 2018Review
- Drosophila relics hobo and hobo-MITEs transposons as raw material for new regulatory networks.Genetics and molecular biology · 2018Article
- Article
- General survey of hAT transposon superfamily with highlight on hobo element in Drosophila.Genetica · 2012Article
- Mar, a MITE family of hAT transposons in Drosophila.Mobile DNA · 2012Article
- The role of vertical and horizontal transfer in the evolution of Paris-like elements in drosophilid species.Genetica · 2011Article
- Sequence Analysis of the Segmental Duplication Responsible for Paris Sex-Ratio Drive in Drosophila simulans.G3 (Bethesda, Md.) · 2011Article
- DNA sequence requirements for hobo transposable element transposition in Drosophila melanogaster.Genetica · 2011Article
- Article
- hAT transposable elements and their derivatives: an analysis in the 12 Drosophila genomes.Genetica · 2010Article
- Hosimary: a new hAT transposon group involved in horizontal transfer.Molecular genetics and genomics : MGG · 2010Article
- The transposon Galileo generates natural chromosomal inversions in Drosophila by ectopic recombination.PloS one · 2009Article
Corrections and comments
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Authors and funding
2 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
In silico searches for sequences homologous to hAT elements in 12 Drosophila genomes have allowed us to identify 37 new hAT elements (8 in D. ananassae, 11 in D. mojavensis, 2 in D. sechellia, 1 in D. simulans, 2 in D. virilis, 3 in D. yakuba, 3 in D. persimilis, 1 in D. grimshawi, 5 in D. willistoni and 1 in D. pseudobscura). The size of these elements varies from 2,359 to 4,962 bp and the terminal inverted repeats (TIRs) show lengths ranging from 10 to 24 bp. Several elements show intact transposase ORFs, suggesting that they are active. Conserved amino acid motifs were identified that correspond to those important for transposase activity. These elements are highly variable and phylogenetic analysis showed that they can be clustered into four different families. Incongruencies were observed between the phylogenies of the transposable elements and those of their hosts, suggesting that horizontal transfer may have occurred between some of the species.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.