Evidence map›Paper›PMID 18339782›Full record

Trial reportChest2008

Variability in small airway epithelial gene expression among normal smokers.

Zeinab Ammous, Neil R Hackett, Marcus W Butler, Tina Raman, Igor Dolgalev, Timothy P O'Connor, Ben-Gary Harvey, Ronald G Crystal

Open access · greenAbstract readClinical Trial
In one paragraph

Trial report in Chest, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Article
  3. Identification ofInternational journal of chronic obstructive pulmonary disease · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. IL-33 Expression Is Lower in Current Smokers at both Transcriptomic and Protein Levels.American journal of respiratory and critical care medicine · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. A large lung gene expression study identifying IL1B as a novel player in airway inflammation in COPD airway epithelial cells.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2018
    Article
  19. Molecular Impact of Electronic Cigarette Aerosol Exposure in Human Bronchial Epithelium.Toxicological sciences : an official journal of the Society of Toxicology · 2017
    Article
  20. Mechanistic Evaluation of the Impact of Smoking and Chronic Obstructive Pulmonary Disease on the Nasal Epithelium.Clinical medicine insights. Circulatory, respiratory and pulmonary medicine · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Zeinab AmmousWeill Cornell Medical College in Qatar, Education City, Doha, Qatar.
Neil R HackettDepartment of Genetic Medicine, Weill Cornell Medical College, New York, NY.
Marcus W ButlerDivision of Pulmonary and Critical Care Medicine, Weill Cornell Medical College, New York, NY.
Tina RamanDepartment of Genetic Medicine, Weill Cornell Medical College, New York, NY.
Igor DolgalevDepartment of Genetic Medicine, Weill Cornell Medical College, New York, NY.
Timothy P O'ConnorDepartment of Genetic Medicine, Weill Cornell Medical College, New York, NY.
Ben-Gary HarveyDivision of Pulmonary and Critical Care Medicine, Weill Cornell Medical College, New York, NY.
Ronald G CrystalDepartment of Genetic Medicine, Weill Cornell Medical College, New York, NY. Electronic address: geneticmedicine@med.cornell.edu.
Cornell University · USWeill Cornell Medical College in Qatar · QA

Funding

CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR024996 · NCRR · WEILL MEDICAL COLL OF CORNELL UNIV · PI IMPERATO-MCGINLEY, JULIANNE L · 2007 to 2011
$49.6M
VEGF VECTOR TO ISCHEMIC MYOCARDIUM W/DIFFUSE CORONARY DISEASEM01RR000047 · NCRR · WEILL MEDICAL COLL OF CORNELL UNIV · PI MCQUIGGAN, MARGARET M · 1985 to 2007
$36.4M
Role of Alveolar Macrophages in the Accelerated Emphysema of HIV-1 PositiveP50HL084936 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI CRYSTAL, RONALD G · 2007 to 2011
$14.2M
Candidate Genes for Susceptibility to BronchitisR01HL074326 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI CRYSTAL, RONALD G · 2004 to 2007
$2.4M
NCRR NIH HHS M01 RR000047NCRR NIH HHS M01 RR 00047NCRR NIH HHS UL1 RR024996NHLBI NIH HHS P50 HL084936NHLBI NIH HHS R01 HL 074326NHLBI NIH HHS R01 HL074326NHLBI NIH HHS U01 HL 084936
6 · The paper itself

Abstract

backgroundDespite overwhelming data that cigarette smoking causes COPD, only a minority of long-term smokers are affected, strongly suggesting that genetic factors modify susceptibility to this disease. We hypothesized that individual variations exist in the response to cigarette smoking, with variability among smokers in expression levels of protective/susceptibility genes.

methodsAffymetrix arrays and quantitative polymerase chain reaction were used to assess the variability of gene expression in the small airway epithelium obtained by fiberoptic bronchoscopy of 18 normal nonsmokers, 18 normal smokers, and 18 smokers with COPD.

resultsWe identified 201 probe sets representing 152 smoking-responsive genes that were significantly up-regulated or down-regulated, and assessed the coefficient of variation in expression levels among the study population. Variation was a reproducible property of each gene as assessed by different microarray probe sets and real-time polymerase chain reaction, and was observed in both normal smokers and smokers with COPD. Greater individual variability was found in smokers with COPD than in normal smokers. The majority of these highly variable smoking-responsive genes were in the functional categories of signal transduction, xenobiotic degradation, metabolism, transport, oxidant related, and transcription. A similar pattern of the same highly variable genes was observed in an independent data set.

conclusionsWe propose that genetic diversity is likely within this subset of genes, with highly variable individual-to-individual responses of the small airway epithelium to smoking, and that this subset of genes represents putative candidates for assessment of susceptibility/protection from disease in future gene-based epidemiologic studies of smokers' risk for COPD.

Indexed as

Gene Expression ProfilingAdultAnalysis of VarianceBronchoscopyFemaleGene Expression RegulationGenetic VariationHumansMaleMiddle AgedOligonucleotide Array Sequence AnalysisPulmonary Disease, Chronic ObstructiveRespiratory Function TestsRespiratory MucosaSmoking

Identifiers

PMID18339782
PMCPMC3632367
OpenAlexW1972594262

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.