Evidence map›Paper›PMID 18339625›Full record

ArticleThe Journal of biological chemistry2008

The Med1 subunit of transcriptional mediator plays a central role in regulating CCAAT/enhancer-binding protein-beta-driven transcription in response to interferon-gamma.

Hui Li, Padmaja Gade, Shreeram C Nallar, Abhijit Raha, Sanjit K Roy, Sreenivasu Karra, Janardan K Reddy, Sekhar P Reddy, Dhananjaya V Kalvakolanu

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Characterization ofToxins · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. CDK8-Novel Therapeutic Opportunities.Pharmaceuticals (Basel, Switzerland) · 2019
    Review
  7. Article
  8. Mediator 1 Is Atherosclerosis Protective by Regulating Macrophage Polarization.Arteriosclerosis, thrombosis, and vascular biology · 2017
    Article
  9. Article
  10. Role of lncRNAs in Cellular Aging.Frontiers in endocrinology · 2016
    Review
  11. Article
  12. Article
  13. Review
  14. CCAR1/CoCoA pair-mediated recruitment of the Mediator defines a novel pathway for GATA1 function.Genes to cells : devoted to molecular & cellular mechanisms · 2014
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Hui LiDepartment of Microbiology and Immunology, Greenebaum Cancer Center, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA.
Padmaja Gade
Shreeram C Nallar
Abhijit Raha
Sanjit K Roy
Sreenivasu Karra
Janardan K Reddy
Sekhar P Reddy
Dhananjaya V Kalvakolanu
U-M Rogel Cancer CenterUniversity of Maryland, Baltimore · USJohns Hopkins University · USNorthwestern University · US

Funding

MODULATION OF IFN ACTION VIA NOVEL REGULATORY FACTORSR01CA078282 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI KALVAKOLANU, DHAN V. · 1998 to 2014
$4.4M
Biologic Studies with Peroxisome Proliferators and PPARsR01GM023750 · NIGMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI REDDY, JANARDAN K. · 1985 to 2008
$4.0M
The Role and Biology of Fra-1 in Lung Injury and RepairR01ES011863 · NIEHS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI REDDY, SEKHAR P. · 2002 to 2013
$3.4M
Transcriptional Coactivators in Liver FunctionR01CA104578 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI REDDY, JANARDAN K. · 2003 to 2007
$1.6M
BIOLOGICAL STUDIES WITH LIVER PEROXISOME PROLIFERATORSR37GM023750 · NIGMS · NORTHWESTERN UNIVERSITY · PI REDDY, JANARDAN K. · 1987 to 1996
–
NCI NIH HHS CA104578NCI NIH HHS CA78282NIEHS NIH HHS ES011863NIGMS NIH HHS GM23750
6 · The paper itself

Abstract

Transcription factor CCAAT/enhancer-binding protein (C/EBP)-beta is crucial for regulating transcription of genes involved in a number of diverse cellular processes, including those involved in some cytokine-induced responses. However, the mechanisms that contribute to its diverse transcriptional activity are not yet fully understood. To gain an understanding into its mechanisms of action, we took a proteomic approach and identified cellular proteins that associate with C/EBP-beta in an interferon (IFN)-gamma-dependent manner. Transcriptional mediator (Mediator) is a multisubunit protein complex that regulates signal-induced cellular gene transcription from enhancer-bound transcription factor(s). Here, we report that the Med1 subunit of the Mediator as a C/EBP-beta-interacting protein. Using gene knock-out cells and mutational and RNA interference approaches, we show that Med1 is critical for IFN-induced expression of certain genes. Med1 associates with C/EBP-beta through a domain located between amino acids 125 and 155 of its N terminus. We also show that the MAPK, ERK1/2, and an ERK phosphorylation site within regulatory domain 2, more specifically the Thr(189) residue, of C/EBP-beta are essential for it to bind to Med1. Last, an ERK-regulated site in Med1 protein is also essential for up-regulating IFN-induced transcription although not critical for binding to C/EBP-beta.

Indexed as

Amino Acid SequenceAnimalsApoptosis Regulatory ProteinsCalcium-Calmodulin-Dependent Protein KinasesCCAAT-Enhancer-Binding Protein-betaCell LineDeath-Associated Protein KinasesEndodeoxyribonucleasesGene Expression RegulationHumansInterferon-gammaInterferon-Stimulated Gene Factor 3, gamma SubunitMiceMice, KnockoutMitogen-Activated Protein Kinase 1Mitogen-Activated Protein Kinase 3Apoptosis Regulatory ProteinsCalcium-Calmodulin-Dependent Protein KinasesCCAAT-Enhancer-Binding Protein-betaDeath-Associated Protein KinasesEndodeoxyribonucleasesInterferon-gammaInterferon-Stimulated Gene Factor 3, gamma SubunitIsgf3g protein, mouseMBD4 protein, humanMbd4 protein, mouseMitogen-Activated Protein Kinase 1Mitogen-Activated Protein Kinase 3Protein SubunitsRecombinant Proteins

Identifiers

PMID18339625
PMCPMC2442347
OpenAlexW1980423829

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.