Evidence map›Paper›PMID 18338782›Full record

ArticleInflammatory bowel diseases2008

Hepatocyte nuclear factor 4alpha in the intestinal epithelial cells protects against inflammatory bowel disease.

Sung-Hoon Ahn, Yatrik M Shah, Junko Inoue, Keiichirou Morimura, Insook Kim, Sunhee Yim, Gilles Lambert, Reiko Kurotani, Kunio Nagashima, Frank J Gonzalez and 1 more

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in Inflammatory bowel diseases, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT01771224 (Effect of Palmitoleic Acid), which is not on this map. Cited by 94 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01771224 early_phase1unknown statusnot on this mapstarted 2013, after this paper: background citation

Effect of Palmitoleic Acid (FAn-7) on Expression of HNF4γ and Ulcerative Colitis (UC) Activity

TypeinterventionalSponsorNational Institute of Medical Sciences and Nutrition, Salvador ZubiranRan2013 to 2014Enrolled20ConditionsInflammatory Bowel Disease, Ulcerative ColitisArmsPalmitoleic acid
3 · Its place in the literature

Who cites it

94 citing papers in PubMed, 1 synthesis or guideline pooled it, 158 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. The role of HNF4α in adenocarcinoma.Biochemical Society transactions · 2026
    Review
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  11. Early subclinical stages of the inflammatory bowel diseases: insights from human and animal studies.American journal of physiology. Gastrointestinal and liver physiology · 2025
    Review
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34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 4 countries.

Sung-Hoon AhnLaboratory of Metabolism, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.
Yatrik M Shah
Junko Inoue
Keiichirou Morimura
Insook Kim
Sunhee Yim
Gilles Lambert
Reiko Kurotani
Kunio Nagashima
Frank J Gonzalez
Yusuke Inoue
National Institutes of Health · USInserm · FROsaka City University · JP

Funding

Xenobiotic ReceptorsZIABC005708 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI GONZALEZ, FRANK J · 2009 to 2025
$16.4M
Xenobiotic ReceptorsZ01BC005708 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI GONZALEZ, FRANK J · 1996 to 2008
$1.7M
Liver-Enriched Transcription FactorsZIABC005561 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI GONZALEZ, FRANK J · 2009 to 2010
$500k
Intramural NIH HHS Z01 BC005708NCI NIH HHS N01 CO012400NCI NIH HHS N01-CO-12400
6 · The paper itself

Abstract

backgroundHepatocyte nuclear factor 4alpha (HNF4alpha; NR2A1) is an orphan member of the nuclear receptor superfamily expressed in liver and intestine. While HNF4alpha expression is critical for liver function, its role in the gut and in the pathogenesis of inflammatory bowel disease (IBD) is unknown.

methodsHuman intestinal biopsies from control and IBD patients were examined for expression of mRNAs encoding HNF4alpha and other nuclear receptors. An intestine-specific HNF4alpha null mouse line (Hnf4alpha(DeltaIEpC)) was generated using an Hnf4alpha-floxed allele and villin-Cre transgene. These mice and their control floxed counterparts (Hnf4alpha(F/F)), were subjected to a dextran sulfate sodium (DSS)-induced IBD colitis protocol and their clinical symptoms and gene expression patterns determined.

resultsIn human intestinal biopsies, HNF4alpha was significantly decreased in intestinal tissues from Crohn's disease and ulcerative colitis patients. HNF4alpha expression was also suppressed in the intestine of DSS-treated mice. In Hnf4alpha(DeltaIEpC) mice, disruption of HNF4alpha expression was observed in the epithelial cells throughout the intestine. In the DSS-induced colitis model Hnf4alpha(DeltaIEpC) mice showed markedly more severe changes in clinical symptoms and pathologies associated with IBD including loss of body weight, colon length, and histological morphology as compared with Hnf4alpha(F/F) mice. Furthermore, the Hnf4alpha(DeltaIEpC) mice demonstrate a significant alteration of mucin-associated genes and increased intestinal permeability, which may play an important role in the increased susceptibility to acute colitis following an inflammatory insult.

conclusionsWhile HNF4alpha does not have a major role in normal function of the intestine, it protects the gut against DSS-induced colitis.

Indexed as

AdultAgedAnimalsAquaporinsBlotting, NorthernBlotting, WesternColitis, UlcerativeColonCrohn DiseaseEpithelial CellsFemaleGene ExpressionHepatocyte Nuclear Factor 4HumansInflammatory Bowel DiseasesIntestinesAquaporinsHepatocyte Nuclear Factor 4MucinsReceptors, Cytoplasmic and NuclearRNA, MessengerTiopronin

Identifiers

PMID18338782
PMCPMC2435391
OpenAlexW2032025006

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.