Evidence map›Paper›PMID 18337694›Full record

ArticleJournal of microbiology (Seoul, Korea)2008

5' Untranslated region of the Pseudomonas putida WCS358 stationary phase sigma factor rpoS mRNA is involved in RpoS translational regulation.

Branko Jovcic, Iris Bertani, Vittorio Venturi, Ljubisa Topisirovic, Milan Kojic

Abstract read
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In one paragraph

Article in Journal of microbiology (Seoul, Korea), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 3 countries.

Branko JovcicInstitute of Molecular Genetics and Genetic Engineering, Vojvode Stepe 444/a, PO Box 23, 11010 Belgrade, Serbia.
Iris Bertani
Vittorio Venturi
Ljubisa Topisirovic
Milan Kojic
Institute of Molecular Genetics and Genetic EngineeringInstitute of Molecular Genetics · RUInternational Centre for Genetic Engineering and Biotechnology · ITNational Center for Genetic Engineering and Biotechnology · TH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The sigmas subunit of RNA polymerase is a central regulator which governs the expression of a host of stationary phase-induced and osmotically regulated genes in Gram-negative bacteria. The Pseudomonas putida rpoS gene is transcribed as a monocistronic rpoS mRNA with a 368 nucleotide-long 5' untranslated region (5' UTR). In this study, we investigate the posttranscriptional control of RpoS synthesis using rpoS-lacZ transcriptional and translational fusions consisting of the native promoter and deletions of 5' UTR or insertion into UTR. The differing activity of constructed translational fusions strongly indicated that the 5' UTR is involved in the translational regulation of RpoS expression in the stationary phase. The results obtained herein demonstrated that the structure of UTR performs an important function in the translational regulation of the rpoS gene.

Indexed as

Protein Biosynthesis5' Untranslated RegionsBacterial ProteinsGene Expression Regulation, BacterialNucleic Acid ConformationPseudomonas putidaRecombinant Fusion ProteinsRNA, BacterialSequence DeletionSigma Factor5' Untranslated RegionsBacterial ProteinsRecombinant Fusion ProteinsRNA, BacterialSigma Factorsigma factor KatF protein, Bacteria

Identifiers

PMID18337694
OpenAlexW2010543667

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.