Evidence map›Paper›PMID 18337506›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

Comparative lesion sequencing provides insights into tumor evolution.

Siân Jones, Wei-Dong Chen, Giovanni Parmigiani, Frank Diehl, Niko Beerenwinkel, Tibor Antal, Arne Traulsen, Martin A Nowak, Christopher Siegel, Victor E Velculescu and 4 more

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 444 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
444citing papers in PubMed, 1 pooled it
18.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

444 citing papers in PubMed, 1 synthesis or guideline pooled it, 826 citations in OpenAlex.

  1. Pooled it
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  15. Evolutionary paths towards metastasis.Nature reviews. Cancer · 2025
    Review
  16. Article
  17. Precision Oncology Framework Using Circulating Tumor Cells.International journal of molecular sciences · 2025
    Review
  18. Article
  19. Article
  20. Article

384 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 3 countries.

Siân JonesThe Ludwig Center for Cancer Genetics and Therapeutics, Department of Biostatistics, Howard Hughes Medical Institute, and Sidney Kimmel Cancer Center at The Johns Hopkins Medical Institutions, Baltimore, MD 21231, USA.
Wei-Dong Chen
Giovanni Parmigiani
Frank Diehl
Niko Beerenwinkel
Tibor Antal
Arne Traulsen
Martin A Nowak
Christopher Siegel
Victor E Velculescu
Kenneth W Kinzler
Bert Vogelstein
Joseph Willis
Sanford D Markowitz
Sidney Kimmel Cancer Center · USUniversity Hospitals of Cleveland · USHarvard University · USETH Zurich · CHHoward Hughes Medical Institute · USJohns Hopkins University · USMax Planck Institute for Evolutionary Biology · DE

Funding

TUMOR METABOLISM PROGRAMP30CA043703 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI Drew James Adams · 1987 to 2026
$142.3M
Tumor Antigens for Individual Signatures and TherapyP50CA062924 · NCI · JOHNS HOPKINS UNIVERSITY · PI JAFFEE, ELIZABETH M. · 1993 to 2022
$54.6M
Transdisciplinary Research on Energetics and CancerU54CA116867 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI BERGER, NATHAN A. · 2005 to 2010
$11.3M
MOLECULAR GENETIC ANALYSIS OF COLORECTAL CANCERR37CA043460 · NCI · JOHNS HOPKINS UNIVERSITY · PI VOGELSTEIN, BERT · 1997 to 2016
$7.4M
Genes from the FAP LocusR37CA057345 · NCI · JOHNS HOPKINS UNIVERSITY · PI KINZLER, KENNETH W. · 2002 to 2016
$7.4M
Large-Scale Genetic Analyses of Human CancerR01CA121113 · NCI · JOHNS HOPKINS UNIVERSITY · PI ANAGNOSTOU, VALSAMO, VELCULESCU, VICTOR E. · 2006 to 2022
$4.3M
15-PGDH, A Novel in Vivo Suppressor of Colon Neoplasia in Mouse and ManR01CA127306 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI MARKOWITZ, SANFORD D. · 2007 to 2011
$2.4M
Evolutionary Graph Theory and Its ApplicationsR01GM078986 · NIGMS · HARVARD UNIVERSITY · PI NOWAK, MARTIN · 2006 to 2009
$1.2M
Statistical Methods for Cancer GenesR01CA105090 · NCI · JOHNS HOPKINS UNIVERSITY · PI PARMIGIANI, GIOVANNI · 2004 to 2007
$997k
Novel Molecular Markers of Human Colon NeoplasiaR01CA120237 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI MARKOWITZ, SANFORD D. · 2006 to 2009
$966k
GENES FROM THE FAP LOCUSR01CA057345 · NCI · JOHNS HOPKINS UNIVERSITY · PI KINZLER, KENNETH W. · 1992 to 2001
$734k
THE P53 GENE IN HUMAN NEOPLASIAR01CA043460 · NCI · JOHNS HOPKINS UNIVERSITY · PI VOGELSTEIN, BERT · 1986 to 1995
–
Howard Hughes Medical InstituteNCI NIH HHS CA043703NCI NIH HHS CA116867NCI NIH HHS CA120237NCI NIH HHS CA121113NCI NIH HHS CA127306NCI NIH HHS CA43460NCI NIH HHS CA57345NCI NIH HHS CA62924NCI NIH HHS P30 CA043703NCI NIH HHS P50 CA062924NCI NIH HHS R01 CA057345NCI NIH HHS R01 CA105090NCI NIH HHS R01 CA120237NCI NIH HHS R01 CA121113NCI NIH HHS R01 CA127306NCI NIH HHS R37 CA043460NCI NIH HHS R37 CA057345NCI NIH HHS U54 CA116867NIGMS NIH HHS GM078986NIGMS NIH HHS R01 GM078986
6 · The paper itself

Abstract

We show that the times separating the birth of benign, invasive, and metastatic tumor cells can be determined by analysis of the mutations they have in common. When combined with prior clinical observations, these analyses suggest the following general conclusions about colorectal tumorigenesis: (i) It takes approximately 17 years for a large benign tumor to evolve into an advanced cancer but <2 years for cells within that cancer to acquire the ability to metastasize; (ii) it requires few, if any, selective events to transform a highly invasive cancer cell into one with the capacity to metastasize; (iii) the process of cell culture ex vivo does not introduce new clonal mutations into colorectal tumor cell populations; and (iv) the rates at which point mutations develop in advanced cancers are similar to those of normal cells. These results have important implications for understanding human tumor pathogenesis, particularly those associated with metastasis.

Indexed as

AdenomaAdultAgedAged, 80 and overAnimalsBase SequenceCell Line, TumorColonic NeoplasmsDNAFemaleGene Expression Regulation, NeoplasticHumansKineticsMaleMiceMice, NudeDNA

Identifiers

PMID18337506
PMCPMC2393770
OpenAlexW2163235555

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.