Evidence map›Paper›PMID 18335199›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2008

Fine mapping and candidate gene analysis of hwh1 and hwh2, a set of complementary genes controlling hybrid breakdown in rice.

Wenzhu Jiang, Sang-Ho Chu, Rihua Piao, Joong-Hyoun Chin, Yong-Mei Jin, Joohyun Lee, Yongli Qiao, Longzhi Han, Zongze Piao, Hee-Jong Koh

Abstract read
PubMed Publisher
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. A recessive LRR-RLK gene causes hybrid breakdown in cotton.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  3. Article
  4. Article
  5. TheBreeding science · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Speciation genes in plants.Annals of botany · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Wenzhu JiangDepartment of Plant Science and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul 151-921, South Korea.
Sang-Ho Chu
Rihua Piao
Joong-Hyoun Chin
Yong-Mei Jin
Joohyun Lee
Yongli Qiao
Longzhi Han
Zongze Piao
Hee-Jong Koh
Seoul National University · KRInstitute of Crop Sciences · CNInternational Rice Research Institute · PHShanghai Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hybrid breakdown (HB), a phenomenon of reduced viability or fertility accompanied with retarded growth in hybrid progenies, often arises in the offspring of intersubspecific hybrids between indica and japonica in rice. We detected HB plants in F8 recombinant inbred lines derived from the cross between an indica variety, Milyang 23, and a japonica variety, Tong 88-7. HB plants showed retarded growth, with fewer tillers and spikelets. Genetic analysis revealed that HB was controlled by the complementary action of two recessive genes, hwh1 and hwh2, originating from each of both parents, which were fine-mapped on the short arm of chromosome 2 and on the near centromere region of the long arm of chromosome 11, respectively. A comparison of the sequences of candidate genes among both parents and HB plants revealed that hwh1 encoded a putative glucose-methanol-choline oxidoreductase with one amino acid change compared to Hwh1 and that hwh2 probably encoded a putative hexose transporter with a six amino acid insertion compared to Hwh2. Investigation of the distribution of these alleles among 54 japonica and indica cultivars using candidate gene-based markers suggested that the two loci might be involved in developing reproductive barriers between two subspecies.

Indexed as

Chromosome MappingGenetic LinkageQuantitative Trait LociChromosomes, PlantCrosses, GeneticDNA, PlantDNA PrimersGenes, PlantHybrid CellsOryzaPeptide FragmentsPhenotypeDNA, PlantDNA PrimersPeptide Fragments

Identifiers

PMID18335199
OpenAlexW2115653791

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.