Evidence map›Paper›PMID 18335190›Full record

ArticleJournal of molecular medicine (Berlin, Germany)2008

The Crohn's disease susceptibility gene DLG5 as a member of the CARD interaction network.

Frauke Friedrichs, Liesbet Henckaerts, Severine Vermeire, Torsten Kucharzik, Tanja Seehafer, Maren Möller-Krull, Erich Bornberg-Bauer, Monika Stoll, January Weiner

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Article in Journal of molecular medicine (Berlin, Germany), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. DLG5 in cell polarity maintenance and cancer development.International journal of biological sciences · 2014
    Review
  5. Review
  6. Review
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Frauke FriedrichsDepartment of Genetic Epidemiology, Leibniz-Institute for Arteriosclerosis Research, University Münster, Münster, Germany.
Liesbet Henckaerts
Severine Vermeire
Torsten Kucharzik
Tanja Seehafer
Maren Möller-Krull
Erich Bornberg-Bauer
Monika Stoll
January Weiner
University of Münster · DELeibniz Association · DEUniversitair Ziekenhuis Leuven · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Discs large homolog 5 (DLG5), a member of the membrane-associated guanylate kinase (MAGUK) family of scaffolding proteins, has been associated with Crohn's disease (CD), but its role in the pathogenesis of this inflammatory bowel disease is disputed. Here, we used sequence comparisons and phylogenies to analyse the DLG5 gene and its protein product. We identified a 5' exon, which codes for an N-terminal caspase recruitment domain (CARD) and experimentally confirmed its expression in colonic tissue. DLG5 shares this new domain with nucleotide-binding oligomerisation domain containing 2 (NOD2); the first CD susceptibility factor identified in genetic studies. An extensive phylogenetic analysis redefines the family organisation of the MAGUK proteins: DLG5 is closely related to CARD10, CARD11 and CARD14, CARD-containing proteins which initiate pro-inflammatory NFkappaB signalling, but not to DLG1-4, previously considered the closest related proteins. Therefore, we suggest renaming DLG5 to correctly annotate the gene in its phylogenetic and functional context. Our study provides evidence that the scaffolding protein DLG5 belongs to the CARD protein family. Thus, DLG5 likely acts in the regulation of NFkB activation or caspase activation as part of host defence mechanisms. As there is substantial crosstalk between CARD-mediated pathways, both CD susceptibility genes, NOD2 and DLG5, may interact functionally to contribute to CD risk.

Indexed as

Genetic Predisposition to DiseaseAmino Acid MotifsAmino Acid SequenceBase SequenceComputational BiologyCrohn DiseaseEvolution, MolecularExonsGenotypeHumansMembrane ProteinsMolecular Sequence DataPhylogenyPolymorphism, GeneticSequence AlignmentSignal TransductionDLG5 protein, humanMembrane ProteinsTumor Suppressor Proteins

Identifiers

PMID18335190
OpenAlexW2149941022

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.