Evidence map›Paper›PMID 18335033›Full record

ArticlePloS one2008

Screen for localized proteins in Caulobacter crescentus.

Jay H Russell, Kenneth C Keiler

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. RNA localization in bacteria.Current opinion in microbiology · 2011
    Review
  3. Poles apart: prokaryotic polar organelles and their spatial regulation.Cold Spring Harbor perspectives in biology · 2011
    Review
  4. Protein localization and dynamics within a bacterial organelle.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  5. High-throughput identification of protein localization dependency networks.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  6. Subcellular localization of a bacterial regulatory RNA.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  7. Quantitative genome-scale analysis of protein localization in an asymmetric bacterium.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jay H RussellDepartment of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania, United States of America.
Kenneth C Keiler
Pennsylvania State University · US

Funding

The Role of tmRNA in development of C. crescentusR01GM068720 · NIGMS · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI KEILER, KENNETH C · 2004 to 2014
$2.3M
NIGMS NIH HHS GM068720NIGMS NIH HHS R01 GM068720
6 · The paper itself

Abstract

Precise localization of individual proteins is required for processes such as motility, chemotaxis, cell-cycle progression, and cell division in bacteria, but the number of proteins that are localized in bacterial species is not known. A screen based on transposon mutagenesis and fluorescence activated cell sorting was devised to identify large numbers of localized proteins, and employed in Caulobacter crescentus. From a sample of the clones isolated in the screen, eleven proteins with no previously characterized localization in C. crescentus were identified, including six hypothetical proteins. The localized hypothetical proteins included one protein that was localized in a helix-like structure, and two proteins for which the localization changed as a function of the cell cycle, suggesting that complex three-dimensional patterns and cell cycle-dependent localization are likely to be common in bacteria. Other mutants produced localized fusion proteins even though the transposon has inserted near the 5' end of a gene, demonstrating that short peptides can contain sufficient information to localize bacterial proteins. The screen described here could be used in most bacterial species.

Indexed as

Bacterial ProteinsBase SequenceCaulobacter crescentusDNA PrimersElectroporationGreen Fluorescent ProteinsMutagenesisPlasmidsBacterial ProteinsDNA PrimersGreen Fluorescent Proteins

Identifiers

PMID18335033
PMCPMC2262157
OpenAlexW1992428239

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.