Evidence map›Paper›PMID 18334716›Full record

ArticleJournal of lipid research2008

Genotype-by-diet effects on co-variation in Lp-PLA2 activity and LDL-cholesterol concentration in baboons fed an atherogenic diet.

Amanda Vinson, Michael C Mahaney, Vince P Diego, Laura A Cox, Jeffrey Rogers, John L VandeBerg, David L Rainwater

Open access · hybridAbstract read
In one paragraph

Article in Journal of lipid research, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Amanda VinsonDepartment of Genetics, Southwest Foundation for Biomedical Research, San Antonio, TX, USA. avinson@sfbrgenetics.org
Michael C Mahaney
Vince P Diego
Laura A Cox
Jeffrey Rogers
John L VandeBerg
David L Rainwater
Texas Biomedical Research Institute · US

Funding

WNV REPLIVAX VACCINE IN NON-HUMAN PRIMATESP51RR013986 · NCRR · TEXAS BIOMEDICAL RESEARCH INSTITUTE · PI GAUDUIN, MARIE-CLAIRE ELISABETH · 1999 to 2011
$79.1M
VETERINARY SERVICES--COREP01HL028972 · NHLBI · TEXAS BIOMEDICAL RESEARCH INSTITUTE · PI RICE, KAREN S · 1985 to 2012
$42.0M
GENETIC MODIFIERS OF SEVERITY IN SICKLE CELL ANEMIAR01HL068922 · NHLBI · CHILDREN'S HOSPITAL BOSTON · PI PLATT, ORAH S · 2001 to 2005
$3.6M
EXTRAMULAR RESEARCH FACILITIES CONSTRUCTIONC06RR017515 · NCRR · SOUTHWEST FOUNDATION FOR BIOMEDICAL RES · PI SHADE, ROBERT E · 2003 to 2003
$3.1M
MOLECULAR GENETIC MARKERS IN PRIMATE DISEASE MODELSR01RR008781 · NCRR · SOUTHWEST FOUNDATION FOR BIOMEDICAL RES · PI ROGERS, JEFFREY A · 1999 to 2005
$1.7M
EXTRAMURAL RES FACILITIES CONSTRC06RR015456 · NCRR · SOUTHWEST FOUNDATION FOR BIOMEDICAL RES · PI VANDEBERG, JOHN L · 2001 to 2001
$1.1M
THE ROLE OF HYALURONAN IN AIRWAY HYPERREACTIVITYR01HL068992 · NHLBI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI MALBRAN FORTEZA, ROSANNA C · 2002 to 2005
$1.1M
BABOON F-CAGE FACILITY FOR PRIMATE RESEARCH CENTERC06RR014578 · NCRR · SOUTHWEST FOUNDATION FOR BIOMEDICAL RES · PI VANDEBERG, JOHN L · 1999 to 1999
–
MOLECULAR AND BIOCHEMICAL GENETICS LABORATORY RENOVATIONC06RR013556 · NCRR · SOUTHWEST FOUNDATION FOR BIOMEDICAL RES · PI SHADE, ROBERT E · 1998 to 1998
–
NCRR NIH HHS C06 RR013556NCRR NIH HHS C06 RR-014578NCRR NIH HHS C06 RR014578NCRR NIH HHS C06 RR015456NCRR NIH HHS C06 RR-017515NCRR NIH HHS C06 RR017515NCRR NIH HHS C06 RR-13556NCRR NIH HHS C06 RR-15456NCRR NIH HHS P51 RR-013986NCRR NIH HHS P51 RR013986NCRR NIH HHS R01 RR-008781NCRR NIH HHS R01 RR008781NHLBI NIH HHS P01 HL-028972NHLBI NIH HHS P01 HL028972NHLBI NIH HHS R01 HL068922NHLBI NIH HHS R01 HL-068992
6 · The paper itself

Abstract

Both lipoprotein-associated phospholipase A(2) (Lp-PLA(2)) activity, a biomarker of inflammation, and concentration of its primary associated lipoprotein, LDL, are correlated with adverse coronary outcomes. We previously reported a quantitative trait locus (QTL) corresponding to HSA2p24.3-p23.2 with pleiotropic effects on Lp-PLA(2) activity and LDL-cholesterol (LDL-C) concentration in baboons fed a basal diet. Here, our goal was to locate pleiotropic QTLs influencing both traits in the same baboons fed a high-cholesterol, high-fat (HCHF) diet, and to assess whether shared genetic effects on these traits differ between diets. We assayed Lp-PLA(2) activity and LDL-C concentration in 683 baboons fed the HCHF diet. We used a bivariate maximum likelihood-based variance components approach in whole-genome linkage screens to locate a QTL [logarithm of odds (LOD) = 3.13, genome-wide P = 0.019] corresponding to HSA19q12-q13.2 with pleiotropic effects on Lp-PLA(2) activity and LDL-C levels in the HCHF diet. We additionally found significant evidence of genetic variance in response to diet for Lp-PLA(2) activity (P = 0.0017) and for LDL-C concentration (P = 0.00001), revealing a contribution of genotype-by-diet interaction to covariation in these two traits. We conclude that the pleiotropic QTLs detected at 2p24.3-p23.2 and 19q12-q13.2 on the basal and HCHF diets, respectively, exert diet-specific effects on covariation in Lp-PLA(2) activity and LDL-C concentration.

Indexed as

1-Alkyl-2-acetylglycerophosphocholine EsteraseAnimalsCholesterol, LDLDietary FatsFemaleGenetic Predisposition to DiseaseGenotypeMalePapioQuantitative Trait LociRisk Factors1-Alkyl-2-acetylglycerophosphocholine EsteraseCholesterol, LDLDietary Fats

Identifiers

PMID18334716
PMCPMC2386906
OpenAlexW2106270029

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.