Evidence map›Paper›PMID 18332128›Full record

ArticleMolecular and cellular biology2008

Regulation of the Drosophila hypoxia-inducible factor alpha Sima by CRM1-dependent nuclear export.

Nuria M Romero, Maximiliano Irisarri, Peggy Roth, Ana Cauerhff, Christos Samakovlis, Pablo Wappner

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.6field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
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  7. eLife · 2019
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  8. Review
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  11. Structural and functional analysis of amphioxus HIFα reveals ancient features of the HIFα family.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2014
    Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Nuria M RomeroInstituto Leloir and FBMC, FCEyN, Universidad de Buenos Aires, CONICET, Patricias Argentinas 435, Buenos Aires 1405, Argentina.
Maximiliano Irisarri
Peggy Roth
Ana Cauerhff
Christos Samakovlis
Pablo Wappner
Fundación Instituto Leloir · ARStockholm University · SEUniversity of Buenos Aires · AR

Funding

Howard Hughes Medical InstituteWellcome TrustWellcome Trust 070161/Z/03/Z
6 · The paper itself

Abstract

Hypoxia-inducible factor alpha (HIF-alpha) proteins are regulated by oxygen levels through several different mechanisms that include protein stability, transcriptional coactivator recruitment, and subcellular localization. It was previously reported that these transcription factors are mainly nuclear in hypoxia and cytoplasmic in normoxia, but so far the molecular basis of this regulation is unclear. We show here that the Drosophila melanogaster HIF-alpha protein Sima shuttles continuously between the nucleus and the cytoplasm. We identified the relevant nuclear localization signal and two functional nuclear export signals (NESs). These NESs are in the Sima basic helix-loop-helix (bHLH) domain and promote CRM1-dependent nuclear export. Site-directed mutagenesis of either NES provoked Sima nuclear retention and increased transcriptional activity, suggesting that nuclear export contributes to Sima regulation. The identified NESs are conserved and probably functional in the bHLH domains of several bHLH-PAS proteins. We propose that rapid nuclear export of Sima regulates the duration of cellular responses to hypoxia.

Indexed as

Active Transport, Cell NucleusAmino Acid SequenceAnimalsAnimals, Genetically ModifiedConserved SequenceDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsEvolution, MolecularExportin 1 ProteinHypoxia-Inducible Factor 1, alpha SubunitKaryopherinsModels, BiologicalMolecular Sequence DataNuclear Export SignalsNuclear Localization SignalsDNA-Binding ProteinsDrosophila ProteinsExportin 1 ProteinHypoxia-Inducible Factor 1, alpha SubunitKaryopherinsNuclear Export SignalsNuclear Localization SignalsReceptors, Cytoplasmic and NuclearSima protein, Drosophila

Identifiers

PMID18332128
PMCPMC2423146
OpenAlexW2166297716

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.