Evidence map›Paper›PMID 18331640›Full record

ArticleBMC cancer2008

Comprehensive analysis of NuMA variation in breast cancer.

Outi Kilpivaara, Matias Rantanen, Anitta Tamminen, Kristiina Aittomäki, Carl Blomqvist, Heli Nevanlinna

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact, top 90% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Outi KilpivaaraDepartment of Obstetrics and Gynecology, Helsinki University Central Hospital, Helsinki, Finland. outi.kilpivaara@helsinki.fi
Matias Rantanen
Anitta Tamminen
Kristiina Aittomäki
Carl Blomqvist
Heli Nevanlinna
Helsinki University Hospital · FIUppsala University Hospital · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundA recent genome wide case-control association study identified NuMA region on 11q13 as a candidate locus for breast cancer susceptibility. Specifically, the variant Ala794Gly was suggested to be associated with increased risk of breast cancer.

methodsIn order to evaluate the NuMa gene for breast cancer susceptibility, we have here screened the entire coding region and exon-intron boundaries of NuMa in 92 familial breast cancer patients and constructed haplotypes of the identified variants. Five missense variants were further screened in 341 breast cancer cases with a positive family history and 368 controls. We examined the frequency of Ala794Gly in an extensive series of familial (n = 910) and unselected (n = 884) breast cancer cases and controls (n = 906), with a high power to detect the suggested breast cancer risk. We also tested if the variant is associated with histopathologic features of breast tumors.

resultsScreening of NuMA resulted in identification of 11 exonic variants and 12 variants in introns or untranslated regions. Five missense variants that were further screened in breast cancer cases with a positive family history and controls, were each carried on a unique haplotype. None of the variants, or the haplotypes represented by them, was associated with breast cancer risk although due to low power in this analysis, very low risk alleles may go unrecognized. The NuMA Ala794Gly showed no difference in frequency in the unselected breast cancer case series or familial case series compared to control cases. Furthermore, Ala794Gly did not show any significant association with histopathologic characteristics of the tumors, though Ala794Gly was slightly more frequent among unselected cases with lymph node involvement.

conclusionOur results do not support the role of NuMA variants as breast cancer susceptibility alleles.

Indexed as

3' Untranslated Regions5' Untranslated RegionsAllelesAntigens, NuclearBreast NeoplasmsCase-Control StudiesCell Cycle ProteinsExonsFemaleGenetic Predisposition to DiseaseGenetic VariationHaplotypesHumansIntronsMutation, MissenseNuclear Matrix-Associated Proteins3' Untranslated Regions5' Untranslated RegionsAntigens, NuclearCell Cycle ProteinsNuclear Matrix-Associated ProteinsNUMA1 protein, human

Identifiers

PMID18331640
PMCPMC2311318
OpenAlexW2040184911

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.