Evidence map›Paper›PMID 18328475›Full record

ArticleDevelopmental biology2008

Identification of downstream genetic pathways of Tbx1 in the second heart field.

Jun Liao, Vimla S Aggarwal, Sonja Nowotschin, Alexei Bondarev, Shari Lipner, Bernice E Morrow

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 144 citations in OpenAlex.

  1. Trial
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  3. GαInternational journal of molecular sciences · 2025
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  6. Right ventricle remodelling: fromJournal of molecular and cellular cardiology plus · 2025
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  7. Article
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  9. Review
  10. Molecular Pathways and Animal Models of Truncus Arteriosus.Advances in experimental medicine and biology · 2024
    Review
  11. Review
  12. Article
  13. Article
  14. The second heart field: the first 20 years.Mammalian genome : official journal of the International Mammalian Genome Society · 2023
    Review
  15. Article
  16. Article
  17. PAX Genes in Cardiovascular Development.International journal of molecular sciences · 2022
    Review
  18. Article
  19. Article
  20. Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jun LiaoDepartment of Molecular Genetics, Albert Einstein College of Medicine, 1300 Morris Park Ave., Bronx, NY 10461, USA.
Vimla S Aggarwal
Sonja Nowotschin
Alexei Bondarev
Shari Lipner
Bernice E Morrow
Albert Einstein College of Medicine · US

Funding

Genetic Analysis of Tbx1 in Ear DisordersR01DC005186 · NIDCD · YESHIVA UNIVERSITY · PI MORROW, BERNICE E · 2003 to 2013
$3.6M
Genetic Modifiers for 22q 11.2 Deletion SyndromeR01HL084410 · NHLBI · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI MORROW, BERNICE E · 2007 to 2010
$3.3M
NHLBI NIH HHS R01 HL084410NIDCD NIH HHS R01 DC005186NIDCD NIH HHS R01DC05186-03
6 · The paper itself

Abstract

Tbx1, a T-box transcription factor, and an important gene for velo-cardio-facial syndrome/DiGeorge syndrome (VCFS/DGS) in humans, causes outflow tract (OFT) heart defects when inactivated in the mouse. Tbx1 is expressed in the second heart field (SHF) and is required in this tissue for OFT development. To identify Tbx1 regulated genetic pathways in the SHF, we performed gene expression profiling of the caudal pharyngeal region in Tbx1(-/-) and wild type embryos. Isl1, a key marker for the SHF, as well as Hod and Nkx2-6, were downregulated in Tbx1(-/-) mutants, while genes required for cardiac morphogenesis, such as Raldh2, Gata4, and Tbx5, as well as a subset of muscle contractile genes, signifying myocardial differentiation, were ectopically expressed. Pan-mesodermal ablation of Tbx1 resulted in similar gene expression changes, suggesting cell-autonomous roles of Tbx1 in regulating these genes. Opposite expression changes concomitant with SHF-derived cardiac defects occurred in TBX1 gain-of-function mutants, indicating that appropriate levels of Tbx1 are required for heart development. When taken together, our studies show that Tbx1 acts upstream in a genetic network that positively regulates SHF cell proliferation and negatively regulates differentiation, cell-autonomously in the caudal pharyngeal region.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsEmbryonic DevelopmentHeartIn Situ HybridizationMiceOligonucleotide Array Sequence AnalysisPharynxPromoter Regions, GeneticReproducibility of ResultsReverse Transcriptase Polymerase Chain ReactionRNAT-Box Domain ProteinsRNAT-Box Domain ProteinsTbx1 protein, mouse

Identifiers

PMID18328475
PMCPMC2494702
OpenAlexW2071846105

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.