Evidence map›Paper›PMID 18327588›Full record

ArticleCurrent genetics2008

Characterization of MYR1, a dosage suppressor of YPT6 and RIC1 deficient mutants.

Alexander Georgiev, Arunas Leipus, Ida Olsson, Jean-Marc Berrez, Ann Mutvei

Abstract read
PubMed Publisher
In one paragraph

Article in Current genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Alexander GeorgievSchool of Life Sciences, Södertörns Högskola, 141 89, Huddinge, Sweden.
Arunas Leipus
Ida Olsson
Jean-Marc Berrez
Ann Mutvei
Södertörn University · SEStockholm University · SEUmeå University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Membrane traffic is tightly regulated and the Rab protein family of small GTPases plays a central role in this regulation. One member of this family is the Saccharomyces cerevisae protein Ypt6. To search for new genes interacting with Ypt6-related pathways, we performed a genetic screen for high copy suppressors of ypt6Delta temperature sensitivity at 35 degrees C. Among the suppressors, MYR1 was also able to suppress the temperature sensitive mutant lacking Ric1, a subunit of the Ypt6 guanine exchanging factor complex Ric1/Rgp1. Myr1 is characterized by a coiled coil region and a GYF domain, a protein module binding proline-rich sequences. Myr1 is able to bind membranes but is also associated with larger structures insoluble in Triton X-100. By immunofluorescence, Myr1 shows a network-like pattern as well as small foci. Overexpression of Myr1 influences nuclear envelope morphology and high levels are lethal. This lethality is rescued when the N-terminal region, containing the GYF domain, is deleted. The transcription profile of a myr1Delta strain shows effects on genes involved in nuclear migration, Ras signalling and transcription. Taken together, these results suggest that Myr1 is a novel factor linked to the secretory pathway and important cellular regulatory mechanisms.

Indexed as

Amino Acid SequenceCarrier ProteinsCell MembraneCell Nucleus ShapeConserved SequenceGuanine Nucleotide Exchange FactorsIntracellular Signaling Peptides and ProteinsMembrane ProteinsMonomeric GTP-Binding ProteinsOctoxynolProtein Structure, TertiaryProtein Transportras ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence DeletionCarrier ProteinsGuanine Nucleotide Exchange FactorsIntracellular Signaling Peptides and ProteinsMembrane ProteinsMonomeric GTP-Binding ProteinsMyr1 protein, S cerevisiaeOctoxynolras ProteinsRIC1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsYPT6 protein, S cerevisiae

Identifiers

PMID18327588
OpenAlexW2055473288

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.