Evidence map›Paper›PMID 18327258›Full record

ArticleNature genetics2008

THM1 negatively modulates mouse sonic hedgehog signal transduction and affects retrograde intraflagellar transport in cilia.

Pamela V Tran, Courtney J Haycraft, Tatiana Y Besschetnova, Annick Turbe-Doan, Rolf W Stottmann, Bruce J Herron, Allyson L Chesebro, Haiyan Qiu, Paul J Scherz, Jagesh V Shah and 2 more

Abstract read
In one paragraph

Article in Nature genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 221 papers.

0numbers the graph read from it
0cells of the map it votes in
221citing papers in PubMed
14.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

221 citing papers in PubMed, 342 citations in OpenAlex.

  1. Genes & diseases · 2026
    Article
  2. Article
  3. Review
  4. Genetic interaction ofbioRxiv : the preprint server for biology · 2025
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  5. Article
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  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Primary cilia are critical for tracheoesophageal septation.Developmental dynamics : an official publication of the American Association of Anatomists · 2024
    Article
  16. Article
  17. Article
  18. Uncovering cilia function in glial development.Annals of human genetics · 2024
    Review
  19. Article
  20. Article

161 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Pamela V TranGenetics Division, Brigham and Women's Hospital, Harvard Medical School, New Research Building, 77 Avenue Louis Pasteur, Boston, Massachusetts 02115, USA.
Courtney J Haycraft *Department of Cell Biology, University of Alabama, McCallum Building, 1918 University Boulevard, Birmingham, Alabama 35294, USA.
Tatiana Y Besschetnova *Renal Division, Brigham and Women's Hospital, Harvard Institutes of Medicine, 4 Blackfan Circle, Harvard Medical School, Boston, Massachusetts 02115, USA.
Annick Turbe-DoanGenetics Division, Brigham and Women's Hospital, Harvard Medical School, New Research Building, 77 Avenue Louis Pasteur, Boston, Massachusetts 02115, USA.
Rolf W StottmannGenetics Division, Brigham and Women's Hospital, Harvard Medical School, New Research Building, 77 Avenue Louis Pasteur, Boston, Massachusetts 02115, USA.
Bruce J HerronGenetics Division, Brigham and Women's Hospital, Harvard Medical School, New Research Building, 77 Avenue Louis Pasteur, Boston, Massachusetts 02115, USA.
Allyson L ChesebroGenetics Division, Brigham and Women's Hospital, Harvard Medical School, New Research Building, 77 Avenue Louis Pasteur, Boston, Massachusetts 02115, USA.
Haiyan QiuGenetics Division, Brigham and Women's Hospital, Harvard Medical School, New Research Building, 77 Avenue Louis Pasteur, Boston, Massachusetts 02115, USA.
Paul J ScherzDepartment of Genetics, Harvard Medical School, New Research Building, 77 Avenue Louis Pasteur, Boston, Massachusetts 02115, USA.
Jagesh V ShahRenal Division, Brigham and Women's Hospital, Harvard Institutes of Medicine, 4 Blackfan Circle, Harvard Medical School, Boston, Massachusetts 02115, USA.
Bradley K YoderDepartment of Cell Biology, University of Alabama, McCallum Building, 1918 University Boulevard, Birmingham, Alabama 35294, USA.
David R BeierGenetics Division, Brigham and Women's Hospital, Harvard Medical School, New Research Building, 77 Avenue Louis Pasteur, Boston, Massachusetts 02115, USA.
Harvard University · USBrigham and Women's Hospital · USUniversity of Alabama at Birmingham · US

Funding

UAB Recessive PKD Research and Translational Core CenterP30DK074038 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI YODER, BRADLEY K. · 2005 to 2019
$16.6M
Mutagenesis and Murine Embyonic DevelopmentR01HD036404 · NICHD · SEATTLE CHILDREN'S HOSPITAL · PI BEIER, DAVID R. · 1998 to 2020
$8.1M
Polycystin channels and calciumP50DK074030 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI ZHOU, JING · 2005 to 2009
$5.9M
Intraflagellar transport mediated regulation of hedgehog signalingR01HD056030 · NICHD · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI YODER, BRADLEY K. · 2008 to 2012
$1.6M
Use of ENU mutagenesis to identify novel genes required for forebrain developmentF32HD053198 · NICHD · BRIGHAM AND WOMEN'S HOSPITAL · PI STOTTMANN, ROLF W · 2007 to 2009
$159k
NICHD NIH HHS F32 HD053198NICHD NIH HHS R01 HD036404NICHD NIH HHS R01 HD056030NICHD NIH HHS R01HD056030NICHD NIH HHS R01HD36404NIDDK NIH HHS P30 DK074038NIDDK NIH HHS P50 DK074030NIDDK NIH HHS P50DK074030
6 · The paper itself

Abstract

Characterization of previously described intraflagellar transport (IFT) mouse mutants has led to the proposition that normal primary cilia are required for mammalian cells to respond to the sonic hedgehog (SHH) signal. Here we describe an N-ethyl-N-nitrosourea-induced mutant mouse, alien (aln), which has abnormal primary cilia and shows overactivation of the SHH pathway. The aln locus encodes a novel protein, THM1 (tetratricopeptide repeat-containing hedgehog modulator-1), which localizes to cilia. aln-mutant cilia have bulb-like structures at their tips in which IFT proteins (such as IFT88) are sequestered, characteristic of Chlamydomonas reinhardtii and Caenorhabditis elegans retrograde IFT mutants. RNA-interference knockdown of Ttc21b (which we call Thm1 and which encodes THM1) in mouse inner medullary collecting duct cells expressing an IFT88-enhanced yellow fluorescent protein fusion recapitulated the aln-mutant cilial phenotype, and live imaging of these cells revealed impaired retrograde IFT. In contrast to previously described IFT mutants, Smoothened and full-length glioblastoma (GLI) proteins localize to aln-mutant cilia. We hypothesize that the aln retrograde IFT defect causes sequestration of IFT proteins in aln-mutant cilia and leads to the overactivated SHH signaling phenotype. Specifically, the aln mutation uncouples the roles of anterograde and retrograde transport in SHH signaling, suggesting that anterograde IFT is required for GLI activation and that retrograde IFT modulates this event.

Indexed as

Signal TransductionAdaptor Proteins, Signal TransducingAlkylating AgentsAmino Acid SequenceAnimalsBiological TransportBlotting, WesternCells, CulturedCiliaCloning, MolecularEthylnitrosoureaFemaleFibroblastsGenes, RecessiveHedgehog ProteinsIn Situ HybridizationAdaptor Proteins, Signal TransducingAlkylating AgentsEthylnitrosoureaHedgehog ProteinsLuminescent ProteinsOncogene ProteinsShh protein, mouseTg737Rpw protein, mouseTrans-ActivatorsTtc21b protein, mouseTumor Suppressor ProteinsZinc Finger Protein GLI1

Identifiers

PMID18327258
PMCPMC4817720
OpenAlexW1995651171

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.