Evidence map›Paper›PMID 18326199›Full record

ArticleJournal of food protection2008

Contributions of two-component regulatory systems, alternative sigma factors, and negative regulators to Listeria monocytogenes cold adaptation and cold growth.

Yvonne C Chan, Yuewei Hu, Soraya Chaturongakul, Kali D Files, Barbara M Bowen, Kathryn J Boor, Martin Wiedmann

Abstract read
In one paragraph

Article in Journal of food protection, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
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  4. An Exploration ofFoods (Basel, Switzerland) · 2022
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  8. The Cobalamin-Dependent Gene Cluster ofFrontiers in microbiology · 2020
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  9. Article
  10. Frontiers in nutrition · 2019
    Article
  11. Initial Transcriptomic Response and Adaption ofFrontiers in microbiology · 2019
    Article
  12. Article
  13. Genotypes Associated withFrontiers in microbiology · 2017
    Article
  14. Article
  15. Transcriptomic Analysis of the Adaptation ofFrontiers in microbiology · 2017
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Yvonne C ChanDepartment of Food Science, Cornell University, Ithaca, New York 14853, USA.
Yuewei Hu
Soraya Chaturongakul
Kali D Files
Barbara M Bowen
Kathryn J Boor
Martin Wiedmann
Cornell University · US

Funding

Sigma B and stress response in Listeria monocytogenesR01AI052151 · NIAID · CORNELL UNIVERSITY ITHACA · PI BOOR, KATHRYN J · 2003 to 2012
$2.7M
NIAID NIH HHS R01 AI052151NIAID NIH HHS R01-AI052151-01A1
6 · The paper itself

Abstract

The ability of Listeria monocytogenes to grow at refrigeration temperatures is critical for transmission of this foodborne pathogen. We evaluated the contributions of different transcriptional regulators and two-component regulatory systems to L. monocytogenes cold adaptation and cold growth. L. monocytogenes parent strain 10403S and selected isogenic null mutants in genes encoding four alternative sigma factors (sigB, sigH, sigC, and sigL), two regulators of sigmaB (rsbT and rsbV), two negative regulators (ctsR and hrcA), and 15 two-component response regulators were grown in brain heart infusion broth at 4 degrees C with (i) a high-concentration starting inoculum (10(8) CFU/ml), (ii) a low-concentration starting inoculum (102 CFU/ml), and (iii) a high-concentration starting inoculum of cold-adapted cells. With a starting inoculum of 10(8) CFU/ml, null mutants in genes encoding selected alternative sigma factors (DeltasigH, DeltasigC, and DeltasigL), a negative regulator (DeltactsR), regulators of sigmaB (DeltarsbT and DeltarsbV), and selected two-component response regulators (DeltalisR, Deltalmo1172, and Deltalmo1060) had significantly reduced growth (P < 0.05) compared with the parent strain after 12 days at 4 degrees C. The growth defect for DeltasigL was limited and was not confirmed by optical density (OD600) measurement data. With a starting inoculum of 102 CFU/ml and after monitoring growth at 4 degrees C over 84 days, only the DeltactsR strain had a consistent but limited growth defect; the other mutant strains had either no growth defects or limited growth defects apparent at only one or two of the nine sampling points evaluated during the 84-day growth period (DeltasigB, DeltasigC, and Deltalmo1172). With a 10(8) CFU/ml starting inoculum of cold-adapted cells, none of the mutant strains that had a growth defect when inoculation was performed with cells pregrown at 37 degrees C had reduced growth as compared with the parent strain after 12 days at 4 degrees C, suggesting a specific defect in the ability of these mutant strains to adapt to 4 degrees C after growth at 37 degrees C. Our data indicate (i) selected sigma factors and two-component regulators may contribute to cold adaptation even though two-component regulatory systems, alternative sigma factors, and the negative regulators CtsR and HrcA appear to have limited contributions to L. monocytogenes growth at 4 degrees C in rich media, and (ii) inoculum concentration and pregrowth conditions affect the L. monocytogenes cold-growth phenotype.

Indexed as

Adaptation, PhysiologicalFood MicrobiologyGene Expression Regulation, BacterialCold TemperatureColony Count, MicrobialFood ContaminationHumansListeria monocytogenesMutationSigma FactorTranscription FactorsSigma FactorTranscription Factors

Identifiers

PMID18326199
PMCPMC4631380
OpenAlexW2408918903

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.