Evidence map›Paper›PMID 18324383›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2008

Separate loci underlie resistance to root infection and leaf scorch during soybean sudden death syndrome.

S Kazi, J Shultz, J Afzal, J Johnson, V N Njiti, D A Lightfoot

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
7.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 84 citations in OpenAlex.

  1. Pathogenicity, Host Resistance, and Genetic Diversity ofJournal of fungi (Basel, Switzerland) · 2024
    Article
  2. Breeding for disease resistance in soybean: a global perspective.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Review
  3. Review
  4. Article
  5. Different loci associated with root and foliar resistance to sudden death syndrome (Fusarium virguliforme) in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  6. Article
  7. Article
  8. Field evaluation of three sources of genetic resistance to sudden death syndrome of soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018
    Article
  9. Article
  10. Integration of sudden death syndrome resistance loci in the soybean genome.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Association mapping of soybean seed germination under salt stress.Molecular genetics and genomics : MGG · 2015
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Usefulness of 10 genomic regions in soybean associated with sudden death syndrome resistance.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

S KaziPlant Biotechnology and Genomics Core-Facility, Department of Plant, Soil, and Agricultural Systems, Southern Illinois University, Carbondale, IL 62901, USA.
J Shultz
J Afzal
J Johnson
V N Njiti
D A Lightfoot
Southern Illinois University Carbondale · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Soybean [Glycine max (L.) Merr.] cultivars show differences in their resistance to both the leaf scorch and root rot of sudden death syndrome (SDS). The syndrome is caused by root colonization by Fusarium virguliforme (ex. F. solani f. sp. glycines). Root susceptibility combined with reduced leaf scorch resistance has been associated with resistance to Heterodera glycines HG Type 1.3.6.7 (race 14) of the soybean cyst nematode (SCN). In contrast, the rhg1 locus underlying resistance to Hg Type 0 was found clustered with three loci for resistance to SDS leaf scorch and one for root infection. The aims of this study were to compare the inheritance of resistance to leaf scorch and root infection in a population that segregated for resistance to SCN and to identify the underlying quantitative trait loci (QTL). "Hartwig", a cultivar partially resistant to SDS leaf scorch, F. virguliforme root infection and SCN HG Type 1.3.6.7 was crossed with the partially susceptible cultivar "Flyer". Ninety-two F5-derived recombinant inbred lines and 144 markers were used for map development. Four QTL found in earlier studies were confirmed. One contributed resistance to leaf scorch on linkage group (LG) C2 (Satt277; P = 0.004, R2 = 15%). Two on LG G underlay root infection at R8 (Satt038; P = 0.0001 R2 = 28.1%; Satt115; P = 0.003, R2 = 12.9%). The marker Satt038 was linked to rhg1 underlying resistance to SCN Hg Type 0. The fourth QTL was on LG D2 underlying resistance to root infection at R6 (Satt574; P = 0.001, R2 = 10%). That QTL was in an interval previously associated with resistance to both SDS leaf scorch and SCN Hg Type 1.3.6.7. The QTL showed repulsion linkage with resistance to SCN that may explain the relative susceptibility to SDS of some SCN resistant cultivars. One additional QTL was discovered on LG G underlying resistance to SDS leaf scorch measured by disease index (Satt130; P = 0.003, R2 = 13%). The loci and markers will provide tagged alleles with which to improve the breeding of cultivars combining resistances to SDS leaf scorch, root infection and SCN HG Type 1.3.6.7.

Indexed as

AnimalsGenetic LinkageGlycine maxNematodaPlant DiseasesPlant LeavesPlant RootsPolymorphism, GeneticQuantitative Trait LociSyndrome

Identifiers

PMID18324383
OpenAlexW2088207751

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.