Evidence map›Paper›PMID 18321969›Full record

ArticleJournal of virology2008

Efficient and specific rescue of human immunodeficiency virus type 1 budding defects by a Nedd4-like ubiquitin ligase.

Yoshiko Usami, Sergei Popov, Elena Popova, Heinrich G Göttlinger

Abstract read
In one paragraph

Article in Journal of virology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed.

  1. Article
  2. Review
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  10. Article
  11. Review
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  14. Viruses go modular.The Journal of biological chemistry · 2020
    Review
  15. Article
  16. The many functions of ESCRTs.Nature reviews. Molecular cell biology · 2020
    Review
  17. Article
  18. Article
  19. Article
  20. HIV-1 gag recruits PACSIN2 to promote virus spreading.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article

17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yoshiko UsamiProgram in Gene Function and Expression, UMass Medical School, Worcester, MA 01605, USA.
Sergei Popov
Elena Popova
Heinrich G Göttlinger

Funding

Molecular Biology of HIV-Gag ProteinsR37AI029873 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI GOTTLINGER, HEINRICH · 2004 to 2013
$5.1M
MOLECULAR BIOLOGY OF HIV GAG PROTEINSR01AI029873 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI GOTTLINGER, HEINRICH · 1990 to 2018
$3.7M
NIAID NIH HHS AI29873NIAID NIH HHS R01 AI029873NIAID NIH HHS R37 AI029873
6 · The paper itself

Abstract

To exit infected cells, human immunodeficiency virus type 1 (HIV-1) exploits the vacuolar protein-sorting pathway by engaging Tsg101 and ALIX through PTAP and LYPx(n)L late assembly (L) domains. In contrast, less-complex retroviruses often use PPxY L domains to recruit Nedd4 family ubiquitin ligases. Although HIV-1 Gag lacks PPxY motifs, we now show that the budding of various HIV-1 L-domain mutants is dramatically enhanced by ectopic Nedd4-2s, a native isoform with a truncated C2 domain. The effect of Nedd4-2s on HIV-1 budding required a catalytically active HECT domain and was specific, since other Nedd4 family proteins showed little activity and an unrelated retrovirus was not rescued. The residual C2 domain of Nedd4-2s was critical for the enhancement of HIV-1 budding and for the association of Nedd4-2s with Gag, as reflected by its incorporation into virus-like particles. Interestingly, the incorporation of Nedd4-2s also depended on its active site, indicating that the ability to form a thioester with ubiquitin was required. These data suggest a novel mechanism by which HIV-1 Gag can connect to cellular budding machinery.

Indexed as

Amino Acid MotifsCell LineEndosomal Sorting Complexes Required for Transportgag Gene Products, Human Immunodeficiency VirusHIV-1HumansNedd4 Ubiquitin Protein LigasesProtein BindingProtein Interaction MappingUbiquitinUbiquitin-Protein LigasesEndosomal Sorting Complexes Required for Transportgag Gene Products, Human Immunodeficiency VirusNedd4 protein, humanNedd4 Ubiquitin Protein Ligasesp6 gag protein, Human immunodeficiency virus 1UbiquitinUbiquitin-Protein Ligases

Identifiers

PMID18321969
PMCPMC2346742

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.