Evidence map›Paper›PMID 18320300›Full record

ArticleJournal of computational neuroscience2008

Initiation and propagation of a neuronal intracellular calcium wave.

Bradford E Peercy

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of computational neuroscience, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Reproducibility in Computational Neuroscience Models and Simulations.IEEE transactions on bio-medical engineering · 2016
    Article
  3. Article
  4. Article
  5. Reaction-diffusion in the NEURON simulator.Frontiers in neuroinformatics · 2013
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Bradford E PeercyLaboratory of Biological Modeling/NIDDK/NIH, Bldg. 12A, Rm 4007, MSC 5621, South Dr., Bethesda, MD 20892-5621, USA. peercyb@mail.nih.gov
National Institutes of Health · US

Funding

Intramural NIH HHS
6 · The paper itself

Abstract

The ability to image calcium movement within individual neurons inspires questions of functionality including whether calcium entry into the nucleus is related to genetic regulation for phenomena such as long term potentiation. Calcium waves have been initiated in hippocampal pyramidal cells with glutmatergic signals both in the presence and absence of back propagating action potentials (BPAPs). The dendritic sites of initiation of these calcium waves within about 100 microm of the soma are thought to be localized near oblique junctions. Stimulation of synapses on oblique dendrites leads to production of inositol 1,4,5-trisphosphate (IP(3)) which diffuses to the apical dendrite igniting awaiting IP(3) receptors (IP(3)Rs) and initiating and propagating catalytic calcium release from the endoplasmic reticulum. We construct a reduced mathematical system which accounts for calcium wave initiation and propagation due to elevated IP(3). Inhomogeneity in IP(3) distribution is responsible for calcium wave initiation versus subthreshold or spatially uniform suprathreshold activation. However, the likelihood that a calcium wave is initiated does not necessarily increase with more calcium entering from BPAPs. For low transient synaptic stimuli, timing between IP(3) generation and BPAPs is critical for calcium wave initiation. We also show that inhomogeneity in IP(3)R density can account for calcium wave directionality. Simulating somatic muscarinic receptor production of IP(3), we can account for the critical difference between calcium wave entry into the soma and failure to do so.

Indexed as

Models, BiologicalAction PotentialsAnimalsBenzofuransCalciumCalcium SignalingDendritesDose-Response Relationship, DrugHippocampusInositol 1,4,5-TrisphosphateInositol 1,4,5-Trisphosphate ReceptorsModels, TheoreticalNerve NetNonlinear DynamicsPyramidal CellsTime Factors1-(benzofuran-2-yl)-2-propylaminopentaneBenzofuransCalciumInositol 1,4,5-TrisphosphateInositol 1,4,5-Trisphosphate Receptors

Identifiers

PMID18320300
OpenAlexW1968613272

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.