Evidence map›Paper›PMID 18317597›Full record

ArticleThe Journal of clinical investigation2008

Premature termination codons in PRPF31 cause retinitis pigmentosa via haploinsufficiency due to nonsense-mediated mRNA decay.

Thomas Rio Frio, Nicholas M Wade, Adriana Ransijn, Eliot L Berson, Jacques S Beckmann, Carlo Rivolta

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05573984 (A Natural History and Outcome Measure Discovery Study of PRPF31 Mutation-Associated Retinal Dystrophy), which is not on this map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05573984 active not recruitingnot on this mapstarted 2022, after this paper: background citation

A Natural History and Outcome Measure Discovery Study of PRPF31 Mutation-Associated Retinal Dystrophy

TypeobservationalSponsorPYC TherapeuticsRan2022 to 2026Enrolled50ConditionsRetinitis Pigmentosa, Eye Diseases, Hereditary, Retinal Dystrophies, Retinal Dystrophy Rod
3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 102 citations in OpenAlex.

  1. Article
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  4. Neurodegenerative spliceosomopathies.Frontiers in cell and developmental biology · 2026
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  5. The RNA content of extracellular vesicles from gene-editedMolecular therapy. Methods & clinical development · 2025
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  10. Review
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  14. Article
  15. Germline Mutations for Kidney Volume in ADPKD.Kidney international reports · 2022
    Article
  16. Article
  17. Article
  18. Observational
  19. Article
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Thomas Rio FrioDepartment of Medical Genetics, University of Lausanne, Lausanne, Switzerland.
Nicholas M Wade
Adriana Ransijn
Eliot L Berson
Jacques S Beckmann
Carlo Rivolta
University of Lausanne · CHUniversity Hospital of Lausanne · CH

Funding

RETINAL ELECTROPHYSIOLOGICAL STUDIESR01EY000169 · NEI · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI BERSON, ELIOT L · 1985 to 2007
$2.0M
ELECTROPHYSIOLOGICAL STUDIES OF RETINAL DEGENERATIONSR37EY000169 · NEI · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI BERSON, ELIOT L · 1992 to 2002
$1.2M
NEI NIH HHS EY00169NEI NIH HHS R01 EY000169NEI NIH HHS R37 EY000169
6 · The paper itself

Abstract

Dominant mutations in the gene encoding the mRNA splicing factor PRPF31 cause retinitis pigmentosa, a hereditary form of retinal degeneration. Most of these mutations are characterized by DNA changes that lead to premature termination codons. We investigated 6 different PRPF31 mutations, represented by single-base substitutions or microdeletions, in cell lines derived from 9 patients with dominant retinitis pigmentosa. Five of these mutations lead to premature termination codons, and 1 leads to the skipping of exon 2. Allele-specific measurement of PRPF31 transcripts revealed a strong reduction in the expression of mutant alleles. As a consequence, total PRPF31 protein abundance was decreased, and no truncated proteins were detected. Subnuclear localization of the full-length PRPF31 that was present remained unaffected. Blocking nonsense-mediated mRNA decay significantly restored the amount of mutant PRPF31 mRNA but did not restore the synthesis of mutant proteins, even in conjunction with inhibitors of protein degradation pathways. Our results indicate that most PRPF31 mutations ultimately result in null alleles through the activation of surveillance mechanisms that inactivate mutant mRNA and, possibly, proteins. Furthermore, these data provide compelling evidence that the pathogenic effect of PRPF31 mutations is likely due to haploinsufficiency rather than to gain of function.

Indexed as

AdultAllelesCell LineCodon, NonsenseEye ProteinsFemaleGene Expression RegulationHaplotypesHumansMaleMiddle AgedMutationProtein TransportRetinitis PigmentosaRNA, MessengerTranscription, GeneticCodon, NonsenseEye ProteinsPRPF31 protein, humanRNA, Messenger

Identifiers

PMID18317597
PMCPMC2262031
OpenAlexW1967387655

What OpenQuestion holds

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Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.