Evidence map›Paper›PMID 18316601›Full record

ArticleCancer research2008

A human breast cell model of preinvasive to invasive transition.

Aylin Rizki, Valerie M Weaver, Sun-Young Lee, Gabriela I Rozenberg, Koei Chin, Connie A Myers, Jamie L Bascom, Joni D Mott, Jeremy R Semeiks, Leslie R Grate and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 174 citations in OpenAlex.

  1. Article
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  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Molecular Mechanisms Driven by MT4-MMP in Cancer Progression.International journal of molecular sciences · 2023
    Review
  10. Article
  11. Review
  12. Review
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  14. Article
  15. Article
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  20. Review

31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 10 institutions in 2 countries.

Aylin RizkiLife Sciences Division, Ernest Orlando Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA. ARizki@vcu.edu
Valerie M Weaver
Sun-Young Lee
Gabriela I Rozenberg
Koei Chin
Connie A Myers
Jamie L Bascom
Joni D Mott
Jeremy R Semeiks
Leslie R Grate
I Saira Mian
Alexander D Borowsky
Roy A Jensen
Michael O Idowu
Fanqing Chen
David J Chen
Ole W Petersen
Joe W Gray
Mina J Bissell
Lawrence Berkeley National Laboratory · USUniversity of California, Davis · USUniversity of Pennsylvania · USThe University of Kansas Cancer Center · USThe University of Texas Southwestern Medical Center · USUniversity of California, San Francisco · USUniversity of California, Santa Cruz · USUniversity of Copenhagen · DKVirginia Commonwealth University · USWashington University in St. Louis · US

Funding

TISSUE CoreP50CA098131 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PARK, BEN HO, PIETENPOL, JENNIFER A · 2003 to 2024
$48.7M
THE IMPACT OF CELLULAR DEFENSE ON THE ROLE OF Ku80 IN GENOME MAINTENANCE AND LONGP01AG017242 · NIA · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI VIJG, JAN · 1999 to 2023
$46.1M
Tissue and Outcomes CoreP50CA058207 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GRAY, JOE W. · 1992 to 2012
$32.7M
Definition of the Microenvironment in Breast CancerR01CA064786 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI BISSELL, MINA · 1995 to 2020
$6.1M
Models for DNA repair and cell cycle control variantsU01ES011044 · NIEHS · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI VIJG, JAN · 2001 to 2006
$5.1M
Roles of DNA PK in DNA Double Strand Break RepairR37CA050519 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI CHEN, DAVID J · 2003 to 2011
$3.5M
Definition of Microenvironment in Breast CancerR37CA064786 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI BISSELL, MINA · 2009 to 2013
$2.0M
NFkB, tissue polarity and apoptosis resistanceR01CA078731 · NCI · UNIVERSITY OF PENNSYLVANIA · PI WEAVER, VALERIE MARIE · 2000 to 2008
$1.9M
A Tumor Related NonTIMP Metalloproteinase InhibitorR01CA088858 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI BANDA, MICHAEL J · 2001 to 2005
$1.3M
ROLES OF DNA PK IN DNA DOUBLE STRAND BREAK REPAIRR01CA050519 · NCI · UNIVERSITY OF CALIF-LOS ALAMOS NAT LAB · PI CHEN, DAVID J · 1989 to 2001
$946k
MMTV-BRCA1 MODELSR01CA080067 · NCI · VANDERBILT UNIVERSITY · PI JENSEN, ROY A. · 1999 to 2003
$946k
NCI NIH HHS CA098131NCI NIH HHS CA50519NCI NIH HHS CA58207NCI NIH HHS CA64786NCI NIH HHS CA78731NCI NIH HHS CA80067NCI NIH HHS CA88858NCI NIH HHS P50 CA058207NCI NIH HHS P50 CA098131NCI NIH HHS R01 CA050519NCI NIH HHS R01 CA064786NCI NIH HHS R01 CA078731NCI NIH HHS R01 CA088858NCI NIH HHS R37 CA050519NCI NIH HHS R37 CA064786NIA NIH HHS P01 AG017242NIEHS NIH HHS U01 ES011044
6 · The paper itself

Abstract

A crucial step in human breast cancer progression is the acquisition of invasiveness. There is a distinct lack of human cell culture models to study the transition from preinvasive to invasive phenotype as it may occur "spontaneously" in vivo. To delineate molecular alterations important for this transition, we isolated human breast epithelial cell lines that showed partial loss of tissue polarity in three-dimensional reconstituted basement membrane cultures. These cells remained noninvasive; however, unlike their nonmalignant counterparts, they exhibited a high propensity to acquire invasiveness through basement membrane in culture. The genomic aberrations and gene expression profiles of the cells in this model showed a high degree of similarity to primary breast tumor profiles. The xenograft tumors formed by the cell lines in three different microenvironments in nude mice displayed metaplastic phenotypes, including squamous and basal characteristics, with invasive cells exhibiting features of higher-grade tumors. To find functionally significant changes in transition from preinvasive to invasive phenotype, we performed attribute profile clustering analysis on the list of genes differentially expressed between preinvasive and invasive cells. We found integral membrane proteins, transcription factors, kinases, transport molecules, and chemokines to be highly represented. In addition, expression of matrix metalloproteinases MMP9, MMP13, MMP15, and MMP17 was up-regulated in the invasive cells. Using small interfering RNA-based approaches, we found these MMPs to be required for the invasive phenotype. This model provides a new tool for dissection of mechanisms by which preinvasive breast cells could acquire invasiveness in a metaplastic context.

Indexed as

Cell Transformation, NeoplasticGene Expression Regulation, NeoplasticAnimalsBreast NeoplasmsCell Line, TumorFemaleGene Expression ProfilingHumansMetaplasiaMiceMice, Inbred BALB CMice, NudeModels, BiologicalNeoplasm InvasivenessNeoplasm Metastasis

Identifiers

PMID18316601
PMCPMC2662716
OpenAlexW2128333867

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.