Evidence map›Paper›PMID 18310413›Full record

ArticleApplied and environmental microbiology2008

Targeted inactivation of francisella tularensis genes by group II introns.

Stephen A Rodriguez, Jieh-Juen Yu, Greg Davis, Bernard P Arulanandam, Karl E Klose

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

  1. Identification of theFrontiers in cellular and infection microbiology · 2025
    Article
  2. Article
  3. Article
  4. Identification ofFrontiers in cellular and infection microbiology · 2022
    Article
  5. Article
  6. Article
  7. A predictedVirulence · 2019
    Article
  8. Article
  9. Article
  10. Article
  11. AFrontiers in microbiology · 2019
    Article
  12. Article
  13. Frontiers in cellular and infection microbiology · 2018
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Bacterial cellular engineering by genome editing and gene silencing.International journal of molecular sciences · 2014
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Stephen A RodriguezDept. of Biology, University of Texas San Antonio, One UTSA Circle, San Antonio, TX 78249, USA.
Jieh-Juen Yu
Greg Davis
Bernard P Arulanandam
Karl E Klose

Funding

UTSA RISE Research Training ProgramR25GM060655 · NIGMS · UNIVERSITY OF TEXAS SAN ANTONIO · PI BAREA-RODRIGUEZ, EDWIN J · 2000 to 2022
$21.6M
Tularemia: Pathogenesis and Host ResponseP01AI057986 · NIAID · UNIVERSITY OF TEXAS SAN ANTONIO · PI KLOSE, KARL E · 2005 to 2009
$6.1M
NIAID NIH HHS P01 AI057986NIAID NIH HHS P01 AI57986NIGMS NIH HHS GM060655NIGMS NIH HHS R25 GM060655
6 · The paper itself

Abstract

Studies of the molecular mechanisms of pathogenesis of Francisella tularensis, the causative agent of tularemia, have been hampered by a lack of genetic techniques for rapid targeted gene disruption in the most virulent subspecies. Here we describe efficient targeted gene disruption in F. tularensis utilizing mobile group II introns (targetrons) specifically optimized for F. tularensis. Utilizing a targetron targeted to blaB, which encodes ampicillin resistance, we showed that the system works at high efficiency in three different subspecies: F. tularensis subsp. tularensis, F. tularensis subsp. holarctica, and "F. tularensis subsp. novicida." A targetron was also utilized to inactivate F. tularensis subsp. holarctica iglC, a gene required for virulence. The iglC gene is located within the Francisella pathogenicity island (FPI), which has been duplicated in the most virulent subspecies. Importantly, the iglC targetron targeted both copies simultaneously, resulting in a strain mutated in both iglC genes in a single step. This system will help illuminate the contributions of specific genes, and especially those within the FPI, to the pathogenesis of this poorly studied organism.

Indexed as

IntronsBacterial Proteinsbeta-LactamasesDNA, BacterialFrancisella tularensisGene TargetingGenetic VectorsMolecular Sequence DataMutagenesis, InsertionalPlasmidsSequence Analysis, DNASpainVirulence FactorsBacterial Proteinsbeta-LactamasesDNA, BacterialVirulence Factors

Identifiers

PMID18310413
PMCPMC2394887

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.