Evidence map›Paper›PMID 18310353›Full record

ArticleEukaryotic cell2008

The heterotrophic dinoflagellate Crypthecodinium cohnii defines a model genetic system to investigate cytoplasmic starch synthesis.

Philippe Deschamps, Delphine Guillebeault, Jimi Devassine, David Dauvillée, Sophie Haebel, Martin Steup, Alain Buléon, Jean-Luc Putaux, Marie-Christine Slomianny, Christophe Colleoni and 6 more

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Crystal Structures of theFrontiers in plant science · 2018
    Article
  7. Starch Synthesis inFrontiers in plant science · 2018
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Genetic dissection of floridean starch synthesis in the cytosol of the model dinoflagellate Crypthecodinium cohnii.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 2 countries.

Philippe DeschampsCNRS, UMR8576, USTL, Cité Scientifique, 59655 Villeneuve d'Ascq, France.
Delphine Guillebeault
Jimi Devassine
David Dauvillée
Sophie Haebel
Martin Steup
Alain Buléon
Jean-Luc Putaux
Marie-Christine Slomianny
Christophe Colleoni
Aline Devin
Charlotte Plancke
Stanislas Tomavo
Evelyne Derelle
Hervé Moreau
Steven Ball
Centre National de la Recherche Scientifique · FRSorbonne Université · FRUniversity of Potsdam · DEObservatoire Océanologique de Banyuls-sur-Mer · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The nature of the cytoplasmic pathway of starch biosynthesis was investigated in the model heterotrophic dinoflagellate Crypthecodinium cohnii. The storage polysaccharide granules were shown to be composed of both amylose and amylopectin fractions with a chain length distribution and crystalline organization very similar to those of green algae and land plant starch. Preliminary characterization of the starch pathway demonstrated that C. cohnii contains multiple forms of soluble starch synthases and one major 110-kDa granule-bound starch synthase. All purified enzymes displayed a marked substrate preference for UDP-glucose. At variance with most other microorganisms, the accumulation of starch in the dinoflagellate occurs during early and mid-log phase, with little or no synthesis witnessed when approaching stationary phase. In order to establish a genetic system allowing the study of cytoplasmic starch metabolism in eukaryotes, we describe the isolation of marker mutations and the successful selection of random recombinant populations after homothallic crosses.

Indexed as

Models, GeneticAlgal ProteinsAnimalsCrosses, GeneticCytoplasmDinoflagellidaHeterotrophic ProcessesMutagenesisProtozoan ProteinsRecombination, GeneticStarchStarch PhosphorylaseStarch SynthaseUridine Diphosphate GlucoseAlgal Proteinsgranule-bound starch synthase IProtozoan ProteinsStarchStarch PhosphorylaseStarch SynthaseUridine Diphosphate Glucose

Identifiers

PMID18310353
PMCPMC2394971
OpenAlexW2156333800

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.